Gene Oter_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0829 
Symbol 
ID6204392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1012027 
End bp1012686 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID641690452 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001817717 
Protein GI182412651 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0121621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGCTC CTCTGAAAAT AGTTTTGGCG GACGATCATG CGCTGGTCCG TGCGGGCATC 
CGCACGCTGC TCGAGAAACT GCCGGGGGTG ACCATCGTCG GCGAGGCGGG CGACGGGCGG
GAAACGGTCA CGCTCGTCCA CACCTTTGCC CCCGATATCG CGATCATGGA TATCACCATG
CCGGGGCTGA ACGGCTTCGA CGCGACGGCA CGCATCGCGC GCGAGCATCC CCGCACGAAG
GTGCTCATCC TGTCGATGCA CACCGCCGAG GATTACGTGC TGCAGGCGTT GCGCGCCGGC
GCCACCGGCT ATTTGCTCAA GGACGCCGCC ACGGCCGAGC TGCAGCTGGC GCTCAATGCC
GTGCGCAAAG GCGAAACCTA CCTGAGCCCG TCGATTTCCA AGAGCGTGCT CGCGCGGTTC
CGGCAGCAGG AACAGGACCC GCGCGCGGAA CCGACCAAGG CACTCACGCC GCGGATGCGC
GAAATCGTCC AGCTGATCGC GGAGGGGCGC AGCACGAAGG AAATCGCGTT TCTGCTCAAC
CTGAGCGTGA AGACGATCGA GACGCACCGG ATGCACCTCA TGGCGCGGCT CGGTTTGCAT
GATGTCGCCG GGGTGGTGCG CTACGCCTTG CGGACGGGAT TGATTTCGGC GGACCATTGA
 
Protein sequence
MPAPLKIVLA DDHALVRAGI RTLLEKLPGV TIVGEAGDGR ETVTLVHTFA PDIAIMDITM 
PGLNGFDATA RIAREHPRTK VLILSMHTAE DYVLQALRAG ATGYLLKDAA TAELQLALNA
VRKGETYLSP SISKSVLARF RQQEQDPRAE PTKALTPRMR EIVQLIAEGR STKEIAFLLN
LSVKTIETHR MHLMARLGLH DVAGVVRYAL RTGLISADH