| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2375 |
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| Symbol | |
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| ID | 5108215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2623489 |
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| End bp | 2624133 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640503618 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001187863 |
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| Protein GI | 146307398 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.405291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0506876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTAGGG TCCTGGTGGT CGACGATCAC GATCTGGTTC GCACGGGCAT CACCCGCATG
CTGGCTGATA TCGATGGTCT GCAAGTGGTA GGCGAAGCCT GCAGCGGGGA AGAAGCCCTG
CTCAAGGTGC GCGAGCTCAA GCCCGATGTC GTTCTGATGG ACGTCAAGAT GCCCGGCATC
GGCGGCCTGG AAGCCACCCG CAAGCTGATG CGCAGCCACC CCGACATCAA GGTCGTCGCC
GTGACCGTGT GCGAGGAAGA TCCTTTCCCG ACGCGTCTGC TGCAGGCAGG TGCTGCCGGC
TATCTGACCA AGGGCGCGGC GCTGGATGAG ATGGTCCAGG CCATTCGCCT GGTCTTCGCC
GGTCAGCGTT ACATCGATCC GCAGATTGCC CAGCAATTGG CACTGAAGTC CTTCCAGCCG
CAGAGCAAAG GCTCGCCGTT CGATCTTCTG TCCGAGCGCG AAATCCAGAT CGCGTTGATG
ATCGCCAACT GCCACAAGGT GCAGAACATC TCCGACAAGC TGTGCCTGTC GCCGAAGACG
GTCAATACCT ATCGCTACCG CATCTTCGAG AAACTCTCCA TTACCAGCGA CGTCGAGCTG
GCCCTGCTTG CGGTACGCCA CGGCATGGTC GACGCCGTCA GCTGA
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| Protein sequence | MIRVLVVDDH DLVRTGITRM LADIDGLQVV GEACSGEEAL LKVRELKPDV VLMDVKMPGI
GGLEATRKLM RSHPDIKVVA VTVCEEDPFP TRLLQAGAAG YLTKGAALDE MVQAIRLVFA
GQRYIDPQIA QQLALKSFQP QSKGSPFDLL SEREIQIALM IANCHKVQNI SDKLCLSPKT
VNTYRYRIFE KLSITSDVEL ALLAVRHGMV DAVS
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