| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003136 |
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| Symbol | |
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| ID | 8556869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1708225 |
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| End bp | 1708863 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406231 |
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| Product | transcriptional regulator LuxR family protein |
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| Protein accession | YP_003285761 |
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| Protein GI | 262393907 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.12843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAC CGATTAGTGT GGTGATTGTT GATGATCATC AAGTGGTCTT AGATGGCTTC
ATGGCTCGCT TGGAGTTAGA GCCTGATATT GAAGTGGTCG GTACAGCAAG CAATGGGCTG
GAAGCGATTG AAGTCGCAAA GCACCTTCAG CCTGATGTCA TCTTGATGGA CATTAGCATG
CCGATAATGA ACGGTATTGA AGCGACAGGG GTAATTAAAG AAGAGCGACC AGAAAGCAAA
ATACTTATGC TGACCATGCA CGATAACCGT GAATACATCA TGAAGGTCAT GCAAGCTGGC
GCAGTAGGGT ACATGCTCAA GGAAATCTCG GCCGAGAAAA TGGTGCAAGC AATAAAAACG
GTGAATCAAG GTTCAACGTA TTTCTGCGAG TCTGTCACAC AAACGCTTTT TACCCAAGAG
GTGGTGCCAG CCACTCAAAA AACGAATCCA CTTAGCCGCA GGGAAGAAGC GGTGCTTAAA
TTAGTCGCTC AAGGAAACAG CAGTAAGAAA ATCGCCACAC TGCTTAACAT TAGCTACCGA
ACGGTAGAGA CGCATCGCCA CAACATTAAG CACAAGTTGG ATTTACATTC GACGGCGGAG
CTAGCGAAAT ATGCGTTTGA AACAGGGTTA ACGGAGTAG
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| Protein sequence | MDKPISVVIV DDHQVVLDGF MARLELEPDI EVVGTASNGL EAIEVAKHLQ PDVILMDISM
PIMNGIEATG VIKEERPESK ILMLTMHDNR EYIMKVMQAG AVGYMLKEIS AEKMVQAIKT
VNQGSTYFCE SVTQTLFTQE VVPATQKTNP LSRREEAVLK LVAQGNSSKK IATLLNISYR
TVETHRHNIK HKLDLHSTAE LAKYAFETGL TE
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