Gene CPS_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1406 
Symbol 
ID3520462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1445821 
End bp1446468 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content37% 
IMG OID637283870 
ProductDNA-binding response regulator 
Protein accessionYP_268149 
Protein GI71279999 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.253896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACT TAAAAGAACT TCCAGTATCG GTACAAATTG TTGACGATCA CCCTATGGTG 
CAAGGTGGTT TGAAAGCGTG TTTATCTTTC TACGATGACA TCATTATTGT TGGCTCAACG
GATGATGGTA GTGATGCACT TAACAAAGCA ATTGAATTGA AACCTGACGT GATCCTAATG
GATATCAGCA TGCCTACCAT GAATGGTATT GATGCCACCG AGATTATCAC CGAACAACTA
CCCGAGACAA AAGTATTGAT TTTGAGTATG CACAGCAATC CCGAATTTGT TAAAAGTGCA
ATTCAGGCTG GTGCGGTGGG GTATTTATTA AAGGATACAA CTTCTGAAGA GATTTATTAC
GCCATCAAAG CGGTCGCGAA TGGTAAAACT CATTTTAGTA GCTCTATCGC CAAATTATTA
ATAGATAATC CGGTTAATAC CAATGAAAGT GAAAAATTGA CCACTAGAGA ACAAGTGGTT
TTATCCTATC TCGCTAAAGG TAAAACCAGT AAAGAGATAG CTAAAATTCT CAACATAAGT
TTTAGAACGG TAGAAGCACA TAGAAGAAAC ATGAAAACCA AGTTAGGCAT TCACTCCTTA
GCAAAACTAA TTAGTTATGC CGTTAAACAC GGCATAATTA AAAATTAA
 
Protein sequence
MSNLKELPVS VQIVDDHPMV QGGLKACLSF YDDIIIVGST DDGSDALNKA IELKPDVILM 
DISMPTMNGI DATEIITEQL PETKVLILSM HSNPEFVKSA IQAGAVGYLL KDTTSEEIYY
AIKAVANGKT HFSSSIAKLL IDNPVNTNES EKLTTREQVV LSYLAKGKTS KEIAKILNIS
FRTVEAHRRN MKTKLGIHSL AKLISYAVKH GIIKN