Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1406 |
Symbol | |
ID | 3520462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1445821 |
End bp | 1446468 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637283870 |
Product | DNA-binding response regulator |
Protein accession | YP_268149 |
Protein GI | 71279999 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.253896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACT TAAAAGAACT TCCAGTATCG GTACAAATTG TTGACGATCA CCCTATGGTG CAAGGTGGTT TGAAAGCGTG TTTATCTTTC TACGATGACA TCATTATTGT TGGCTCAACG GATGATGGTA GTGATGCACT TAACAAAGCA ATTGAATTGA AACCTGACGT GATCCTAATG GATATCAGCA TGCCTACCAT GAATGGTATT GATGCCACCG AGATTATCAC CGAACAACTA CCCGAGACAA AAGTATTGAT TTTGAGTATG CACAGCAATC CCGAATTTGT TAAAAGTGCA ATTCAGGCTG GTGCGGTGGG GTATTTATTA AAGGATACAA CTTCTGAAGA GATTTATTAC GCCATCAAAG CGGTCGCGAA TGGTAAAACT CATTTTAGTA GCTCTATCGC CAAATTATTA ATAGATAATC CGGTTAATAC CAATGAAAGT GAAAAATTGA CCACTAGAGA ACAAGTGGTT TTATCCTATC TCGCTAAAGG TAAAACCAGT AAAGAGATAG CTAAAATTCT CAACATAAGT TTTAGAACGG TAGAAGCACA TAGAAGAAAC ATGAAAACCA AGTTAGGCAT TCACTCCTTA GCAAAACTAA TTAGTTATGC CGTTAAACAC GGCATAATTA AAAATTAA
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Protein sequence | MSNLKELPVS VQIVDDHPMV QGGLKACLSF YDDIIIVGST DDGSDALNKA IELKPDVILM DISMPTMNGI DATEIITEQL PETKVLILSM HSNPEFVKSA IQAGAVGYLL KDTTSEEIYY AIKAVANGKT HFSSSIAKLL IDNPVNTNES EKLTTREQVV LSYLAKGKTS KEIAKILNIS FRTVEAHRRN MKTKLGIHSL AKLISYAVKH GIIKN
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