| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1205 |
|---|
| Symbol | |
|---|
| ID | 7258175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1302357 |
|---|
| End bp | 1302995 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643561119 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_002457699 |
|---|
| Protein GI | 219667264 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TCAAGGTCTT TCTGGTCGAT GACCATACTA TTTTTCGTCA GGGTATTAGA
TTACTTTTAA AGTTGCAAAG TGATCTAGAA GTAATTGGCG AAGCGGATAA TGGTGCTCAA
GCAGTATTGA TGGTGCAGCA ATTAAATCCC GATGTTGTTT TGATGGACAT TGCAATGAAA
GGAATGGATG GACTAACGGC TACAAAAGAT ATTCTTGCAG CGTCTCCAAA GACCAAAGTC
ATTCTTCTAA CCCAACATGA AAATAAAGAA TACATTCTTC CAGCTTTAAA GATTGGTGCG
GCAGGTTATG TTCTTAAACG GGCAGCAGCC GATGAAGTAG TAAATGCTAT TCGAACAACG
TACCAGGGAC GTTCATTTTT AGATCCTGAA ATATCAGATA TTGTGGTTAA TGCTTATAGG
CATGGAAGTG AAGATGAATA TGAGACTTTA ACCGAGCGAG AAAGAGAAAT CCTTATCCTT
CTTGCGAAGG GGCATACCAA TAATGAAATC GCTCCTATTT TAAATATTAG TGCCAAGACC
GTTGATTATC ATCGATCCAA TCTCATGAAA AAGTTAAATC TTCATAGTAA AGTGGAATTA
ACTAAGTATG CATTAAAAAG AGGTCTTATC CACACCTAA
|
|---|
| Protein sequence | MKKIKVFLVD DHTIFRQGIR LLLKLQSDLE VIGEADNGAQ AVLMVQQLNP DVVLMDIAMK
GMDGLTATKD ILAASPKTKV ILLTQHENKE YILPALKIGA AGYVLKRAAA DEVVNAIRTT
YQGRSFLDPE ISDIVVNAYR HGSEDEYETL TEREREILIL LAKGHTNNEI APILNISAKT
VDYHRSNLMK KLNLHSKVEL TKYALKRGLI HT
|
|---|
| |