Gene Dhaf_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1205 
Symbol 
ID7258175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1302357 
End bp1302995 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content37% 
IMG OID643561119 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002457699 
Protein GI219667264 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA TCAAGGTCTT TCTGGTCGAT GACCATACTA TTTTTCGTCA GGGTATTAGA 
TTACTTTTAA AGTTGCAAAG TGATCTAGAA GTAATTGGCG AAGCGGATAA TGGTGCTCAA
GCAGTATTGA TGGTGCAGCA ATTAAATCCC GATGTTGTTT TGATGGACAT TGCAATGAAA
GGAATGGATG GACTAACGGC TACAAAAGAT ATTCTTGCAG CGTCTCCAAA GACCAAAGTC
ATTCTTCTAA CCCAACATGA AAATAAAGAA TACATTCTTC CAGCTTTAAA GATTGGTGCG
GCAGGTTATG TTCTTAAACG GGCAGCAGCC GATGAAGTAG TAAATGCTAT TCGAACAACG
TACCAGGGAC GTTCATTTTT AGATCCTGAA ATATCAGATA TTGTGGTTAA TGCTTATAGG
CATGGAAGTG AAGATGAATA TGAGACTTTA ACCGAGCGAG AAAGAGAAAT CCTTATCCTT
CTTGCGAAGG GGCATACCAA TAATGAAATC GCTCCTATTT TAAATATTAG TGCCAAGACC
GTTGATTATC ATCGATCCAA TCTCATGAAA AAGTTAAATC TTCATAGTAA AGTGGAATTA
ACTAAGTATG CATTAAAAAG AGGTCTTATC CACACCTAA
 
Protein sequence
MKKIKVFLVD DHTIFRQGIR LLLKLQSDLE VIGEADNGAQ AVLMVQQLNP DVVLMDIAMK 
GMDGLTATKD ILAASPKTKV ILLTQHENKE YILPALKIGA AGYVLKRAAA DEVVNAIRTT
YQGRSFLDPE ISDIVVNAYR HGSEDEYETL TEREREILIL LAKGHTNNEI APILNISAKT
VDYHRSNLMK KLNLHSKVEL TKYALKRGLI HT