Gene Gbem_0451 details

Gene Information

• Locus tag: Gbem_0451
• ID: 6783278
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 544221
• End bp: 544871
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642766420
• Product: two component transcriptional regulator, LuxR family
• Protein accession: YP_002137276
• Protein GI: 197116849
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATGA AGGTACTGAT CGTGGACGAC CACACCATAG TGAGGCAGGG GTTGCGCGTA 
CTGATCGACA AGGAACAGGA TATGGAGGTG ATCGCCGAGG CTGCCACCGG CGCCGAGGCG 
ATCCGATTGG CCCGCGAAAA GCGCCCCGAC GTCACGGTTA TGGATATCAC CATGCCCGAC 
CTAAATGGCA TCGACGCCAC GCGCGCCATC ATCGCGGAGT GGCCGCAGGC GCGGGTGCTG 
GCGCTTTCCA TGGAGTCGGA CCGGCGCTTC GTGGTGGAGG TACTGAAGGC AGGCGCCAAC 
GGCTACGTCC TCAAGGACTC GGCCTTTGCC GAACTCGCCA CTGCGATCCG GGCCGTCGCC 
ACGGGGGAGA CCTATCTCCC TTCCAGGGTG ACCACGCTTT TGATCAAGGA GTACCTGCAG 
CGCATTCCCG ACGAGGTGCC GGCTACCTAC GAGAACCTCT CACAGCGGGA AAGGGAGATC 
CTGCAGCTGA TCGCCGACGG CAGAAACGCG AAGGAGATCG CCTTCAGCTT CGGTGTCAGC 
GTGAAGACGG TGGAGAACCA GCGGCACAGC ATCATGAAAA AGCTGGACCT TTTCAGCATC 
GCCGAGTTGA CCAAGTACGC CGTACGCCAG GGTCTCACCT CGCTCAGTTG A 

 

Protein sequence

MSMKVLIVDD HTIVRQGLRV LIDKEQDMEV IAEAATGAEA IRLAREKRPD VTVMDITMPD 
LNGIDATRAI IAEWPQARVL ALSMESDRRF VVEVLKAGAN GYVLKDSAFA ELATAIRAVA 
TGETYLPSRV TTLLIKEYLQ RIPDEVPATY ENLSQREREI LQLIADGRNA KEIAFSFGVS 
VKTVENQRHS IMKKLDLFSI AELTKYAVRQ GLTSLS