More than 300 homologs were found in PanDaTox collection
for query gene Spea_2299 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  100 
 
 		 221 aa  440  1e-123  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  57.48 
 
 		 215 aa  250  2e-65  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal  1 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  41.74 
 
 		 219 aa  195  4.0000000000000005e-49  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  43.13 
 
 		 217 aa  173  1.9999999999999998e-42  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  41.2 
 
 		 226 aa  170  2e-41  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  41.67 
 
 		 219 aa  167  1e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_3526  DNA-binding response regulator, LuxR family  38.89 
 
 		 220 aa  164  1.0000000000000001e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0134281  n/a   
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  40.93 
 
 		 219 aa  164  1.0000000000000001e-39  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  40.93 
 
 		 219 aa  162  3e-39  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_007005  Psyr_3299  LuxR response regulator receiver  37.79 
 
 		 220 aa  162  3e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0158345  normal  1 
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  40.47 
 
 		 219 aa  162  4.0000000000000004e-39  Pseudomonas putida W619  Bacteria  normal  0.118638  normal  1 
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  40.93 
 
 		 219 aa  162  5.0000000000000005e-39  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  40.93 
 
 		 213 aa  161  7e-39  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  35.78 
 
 		 218 aa  160  1e-38  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  38.6 
 
 		 223 aa  160  1e-38  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  35.78 
 
 		 218 aa  160  1e-38  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  37.74 
 
 		 216 aa  159  3e-38  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  36.24 
 
 		 218 aa  159  3e-38  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  37.26 
 
 		 216 aa  158  7e-38  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  36.92 
 
 		 211 aa  158  7e-38  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  37.32 
 
 		 213 aa  157  2e-37  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  38.1 
 
 		 218 aa  156  2e-37  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  37.56 
 
 		 215 aa  156  3e-37  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  36.7 
 
 		 218 aa  154  1e-36  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  35.51 
 
 		 216 aa  154  2e-36  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  38.5 
 
 		 215 aa  152  2.9999999999999998e-36  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  37.5 
 
 		 221 aa  152  4e-36  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  35.65 
 
 		 218 aa  152  5e-36  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_2437  two component transcriptional regulator, LuxR family  42.86 
 
 		 218 aa  151  5.9999999999999996e-36  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  37.74 
 
 		 214 aa  150  2e-35  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  39.23 
 
 		 215 aa  149  2e-35  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  39.23 
 
 		 215 aa  149  2e-35  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  39.23 
 
 		 215 aa  149  2e-35  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_2685  two component LuxR family transcriptional regulator  38.97 
 
 		 222 aa  149  3e-35  Caulobacter sp. K31  Bacteria  normal  0.120511  normal  1 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  37.2 
 
 		 214 aa  149  4e-35  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  36.11 
 
 		 218 aa  149  4e-35  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  35.38 
 
 		 232 aa  148  6e-35  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  36.95 
 
 		 213 aa  147  1.0000000000000001e-34  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  37.44 
 
 		 213 aa  147  1.0000000000000001e-34  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_010625  Bphy_5813  two component LuxR family transcriptional regulator  36.32 
 
 		 215 aa  147  1.0000000000000001e-34  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.118405 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  34.91 
 
 		 232 aa  147  1.0000000000000001e-34  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  35.85 
 
 		 212 aa  146  2.0000000000000003e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  34.43 
 
 		 222 aa  146  3e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  37.62 
 
 		 226 aa  146  3e-34  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  35.19 
 
 		 223 aa  145  3e-34  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  37.14 
 
 		 206 aa  145  4.0000000000000006e-34  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  35.92 
 
 		 215 aa  145  5e-34  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  35.81 
 
 		 217 aa  145  6e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.525358 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  34.91 
 
 		 232 aa  144  9e-34  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  34.98 
 
 		 220 aa  144  9e-34  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  35.98 
 
 		 218 aa  144  1e-33  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010622  Bphy_1137  two component LuxR family transcriptional regulator  36.32 
 
 		 214 aa  144  1e-33  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  38.28 
 
 		 219 aa  144  1e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  37.02 
 
 		 210 aa  144  1e-33  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0301144 
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  35.21 
 
 		 217 aa  144  1e-33  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  35.21 
 
 		 217 aa  144  1e-33  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  35.44 
 
 		 215 aa  143  2e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  35.44 
 
 		 215 aa  143  2e-33  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_010571  Oter_3186  two component LuxR family transcriptional regulator  35.58 
 
 		 215 aa  143  2e-33  Opitutus terrae PB90-1  Bacteria  normal  0.0678517  normal  1 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  35.44 
 
 		 215 aa  143  2e-33  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  35.44 
 
 		 215 aa  143  2e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A0728  two component LuxR family transcriptional regulator  36.54 
 
 		 217 aa  143  2e-33  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  36.11 
 
 		 244 aa  143  2e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  35.29 
 
 		 221 aa  143  2e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  35.98 
 
 		 214 aa  143  2e-33  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  36.54 
 
 		 213 aa  143  2e-33  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  35.44 
 
 		 215 aa  143  2e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  35.44 
 
 		 215 aa  143  2e-33  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  32.72 
 
 		 238 aa  142  3e-33  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  36.7 
 
 		 220 aa  142  3e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  33.94 
 
 		 229 aa  142  4e-33  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  36.89 
 
 		 213 aa  142  5e-33  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  35.21 
 
 		 216 aa  142  5e-33  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  34.29 
 
 		 216 aa  142  6e-33  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal  1 
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  36.92 
 
 		 219 aa  141  6e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  35.47 
 
 		 215 aa  141  7e-33  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  33.64 
 
 		 219 aa  141  8e-33  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_7047  two component LuxR family transcriptional regulator  34.91 
 
 		 215 aa  141  9e-33  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.976007 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  35.92 
 
 		 214 aa  141  9e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  35.92 
 
 		 214 aa  141  9e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  35.92 
 
 		 214 aa  141  9e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  37.44 
 
 		 214 aa  140  9.999999999999999e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  35.48 
 
 		 215 aa  140  9.999999999999999e-33  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  36.45 
 
 		 214 aa  140  9.999999999999999e-33  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  36.99 
 
 		 219 aa  140  1.9999999999999998e-32  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  32.08 
 
 		 213 aa  140  1.9999999999999998e-32  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  33.98 
 
 		 214 aa  140  1.9999999999999998e-32  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  34.76 
 
 		 216 aa  140  1.9999999999999998e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  34.76 
 
 		 229 aa  139  1.9999999999999998e-32  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  34.72 
 
 		 264 aa  140  1.9999999999999998e-32  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_4476  two component transcriptional regulator, LuxR family  37.38 
 
 		 215 aa  140  1.9999999999999998e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  35.41 
 
 		 212 aa  140  1.9999999999999998e-32  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  34.91 
 
 		 215 aa  140  1.9999999999999998e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal  1 
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  35.85 
 
 		 215 aa  139  3e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  35.85 
 
 		 215 aa  139  3e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  35.44 
 
 		 214 aa  139  3e-32  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  34.88 
 
 		 215 aa  139  3e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  34.58 
 
 		 216 aa  139  3e-32  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  35.85 
 
 		 215 aa  139  3e-32  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_2911  two component transcriptional regulator, LuxR family  35.24 
 
 		 209 aa  139  3e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
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