Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4946 |
Symbol | |
ID | 4313837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1960165 |
End bp | 1960809 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152789 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_776829 |
Protein GI | 115359691 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0203352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCC CCGACACTGA CCGGCCCGCC GCCCGACTGC TGCTCGTCGA CGACCACCCG CTGGTGCGCG ACGGCCTGCG GATGCGGCTC GAGGCGGCCG ACCTGTCCGT GGTCGGCGAA GCCGGCAACG CCGACGAAGC GCTCGCGCTG GCCGCGTCGC TCGAGCCCGA TCTCGCGCTG ATGGACGTCG GCATGAACGG GATGAACGGC ATCACGCTCG CCGGCGTGTT CCACGAACGC TTTCCGGGGA TTCGCGTGCT GATGCTGTCG ATGCACGACA ACATCGAGTA CGTGACGCAG GCCGTGCGCG CCGGCGCGAG CGGCTACCTC CTGAAGGATT CGCCGGCGAG CGAGATCGTC CGCGCGATTG GCGCGGTGCT GGCCGGGCAG ACGTTCTTCA GCGAAGGGCT CGCGGCACGG ATGATCCAGG CGAGCGCGAC CGCGTCGCCG CTCGACCGCT TGACGCCGCG CGAACGCGAC ATCCTCGACG CGCTGGCCGA GGGGCTGTCG AGCAAGCAGA TCGCGCAGCA GACGGGGTTG TCGGTGCGCA CGGTGGAAAC CCATCGGCTG AATCTGAAGC GCAAGCTCGA GATCGAAGGG CAGGCGGAGC TGATCAAGTT CGCGGTCGAG CATCGGCGGC GATAG
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Protein sequence | MSAPDTDRPA ARLLLVDDHP LVRDGLRMRL EAADLSVVGE AGNADEALAL AASLEPDLAL MDVGMNGMNG ITLAGVFHER FPGIRVLMLS MHDNIEYVTQ AVRAGASGYL LKDSPASEIV RAIGAVLAGQ TFFSEGLAAR MIQASATASP LDRLTPRERD ILDALAEGLS SKQIAQQTGL SVRTVETHRL NLKRKLEIEG QAELIKFAVE HRRR
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