More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_3042 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  100 
 
 		 222 aa  439  9.999999999999999e-123  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  80.36 
 
 		 221 aa  353  1e-96  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  65.12 
 
 		 220 aa  276  2e-73  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_007925  RPC_3790  two component LuxR family transcriptional regulator  53.02 
 
 		 226 aa  229  2e-59  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  53.05 
 
 		 223 aa  228  7e-59  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  51.17 
 
 		 228 aa  225  5.0000000000000005e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  51.64 
 
 		 228 aa  224  8e-58  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  51.17 
 
 		 228 aa  223  1e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4449  two component LuxR family transcriptional regulator  51.85 
 
 		 230 aa  220  9.999999999999999e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.683214 
 
 
-
 
NC_007958  RPD_2401  response regulator receiver  51.39 
 
 		 230 aa  218  7.999999999999999e-56  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0808908 
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  49.3 
 
 		 223 aa  212  4.9999999999999996e-54  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_011004  Rpal_3423  two component transcriptional regulator, LuxR family  49.77 
 
 		 235 aa  208  6e-53  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.324081  n/a   
 
 
-
 
NC_009485  BBta_3079  two component LuxR family transcriptional regulator  48.84 
 
 		 233 aa  201  7e-51  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_0851  two component transcriptional regulator, LuxR family  48.13 
 
 		 232 aa  196  2.0000000000000003e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  45.41 
 
 		 218 aa  186  2e-46  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  45.41 
 
 		 218 aa  186  2e-46  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_010725  Mpop_4860  two component transcriptional regulator, LuxR family  47.75 
 
 		 236 aa  186  3e-46  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.142587 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  40.74 
 
 		 215 aa  184  6e-46  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  44.95 
 
 		 218 aa  184  7e-46  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  40.09 
 
 		 217 aa  184  1.0000000000000001e-45  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  45.07 
 
 		 218 aa  183  2.0000000000000003e-45  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  44.39 
 
 		 219 aa  178  5.999999999999999e-44  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_010725  Mpop_0347  two component transcriptional regulator, LuxR family  43.4 
 
 		 222 aa  175  4e-43  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_1985  two component transcriptional regulator, LuxR family  42.92 
 
 		 222 aa  174  9.999999999999999e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  41.59 
 
 		 214 aa  174  9.999999999999999e-43  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_010172  Mext_1668  response regulator receiver  42.92 
 
 		 222 aa  174  9.999999999999999e-43  Methylobacterium extorquens PA1  Bacteria  normal  0.679138  normal  1 
 
 
-
 
NC_010172  Mext_4343  response regulator receiver  43.64 
 
 		 236 aa  172  3.9999999999999995e-42  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_4712  two component transcriptional regulator, LuxR family  43.64 
 
 		 236 aa  172  3.9999999999999995e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.37561  normal  1 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  45.37 
 
 		 228 aa  171  5.999999999999999e-42  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  41.51 
 
 		 217 aa  167  1e-40  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  40.47 
 
 		 214 aa  166  4e-40  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_014148  Plim_3764  response regulator receiver  42.72 
 
 		 217 aa  165  5.9999999999999996e-40  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.321181  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  38.79 
 
 		 213 aa  165  5.9999999999999996e-40  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  36.11 
 
 		 212 aa  162  4.0000000000000004e-39  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  38.21 
 
 		 215 aa  162  4.0000000000000004e-39  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  37.79 
 
 		 216 aa  161  6e-39  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  41.23 
 
 		 217 aa  161  9e-39  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A1235  two component LuxR family transcriptional regulator  40.38 
 
 		 211 aa  160  1e-38  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  37.09 
 
 		 213 aa  160  1e-38  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  42.92 
 
 		 206 aa  160  1e-38  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_011071  Smal_1526  two component transcriptional regulator, LuxR family  42.25 
 
 		 215 aa  160  2e-38  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.88337  normal  1 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  42.38 
 
 		 217 aa  160  2e-38  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  38.68 
 
 		 216 aa  159  3e-38  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  41.59 
 
 		 230 aa  159  3e-38  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  40.09 
 
 		 214 aa  159  4e-38  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  38.79 
 
 		 215 aa  158  6e-38  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  38.99 
 
 		 213 aa  156  2e-37  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  36.02 
 
 		 206 aa  156  2e-37  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_1290  two component LuxR family transcriptional regulator  41.51 
 
 		 209 aa  155  3e-37  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.542915  normal  1 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  34.26 
 
 		 218 aa  156  3e-37  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  40.09 
 
 		 228 aa  155  4e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  40.09 
 
 		 221 aa  155  5.0000000000000005e-37  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_010717  PXO_01515  transcriptional regulator LuxR/uhpA family  41.31 
 
 		 215 aa  155  5.0000000000000005e-37  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.422594  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  40 
 
 		 217 aa  155  5.0000000000000005e-37  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  38.6 
 
 		 224 aa  155  6e-37  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  34.91 
 
 		 216 aa  155  6e-37  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  39.05 
 
 		 214 aa  155  7e-37  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  41.71 
 
 		 215 aa  154  1e-36  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  38.03 
 
 		 232 aa  154  1e-36  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  37.33 
 
 		 222 aa  154  1e-36  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  38.97 
 
 		 226 aa  154  1e-36  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  42.38 
 
 		 235 aa  154  1e-36  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  40.19 
 
 		 208 aa  153  2e-36  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  42.31 
 
 		 217 aa  153  2e-36  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  38.5 
 
 		 215 aa  153  2e-36  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  38.14 
 
 		 224 aa  153  2e-36  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  39.05 
 
 		 214 aa  153  2e-36  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  38.5 
 
 		 232 aa  152  2.9999999999999998e-36  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  38.5 
 
 		 215 aa  152  2.9999999999999998e-36  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  42.06 
 
 		 221 aa  152  2.9999999999999998e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  38.03 
 
 		 215 aa  152  2.9999999999999998e-36  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  40 
 
 		 213 aa  152  2.9999999999999998e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  43.27 
 
 		 214 aa  152  2.9999999999999998e-36  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  38.14 
 
 		 224 aa  152  4e-36  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  38.14 
 
 		 224 aa  152  4e-36  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  36.41 
 
 		 217 aa  152  4e-36  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  36.41 
 
 		 217 aa  152  4e-36  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  38.5 
 
 		 210 aa  152  4e-36  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  38.5 
 
 		 215 aa  152  5e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  41.82 
 
 		 229 aa  152  5e-36  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  35.94 
 
 		 218 aa  151  5.9999999999999996e-36  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  38.14 
 
 		 215 aa  152  5.9999999999999996e-36  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  38.14 
 
 		 215 aa  152  5.9999999999999996e-36  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  38.14 
 
 		 215 aa  152  5.9999999999999996e-36  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  38.14 
 
 		 215 aa  152  5.9999999999999996e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  38.14 
 
 		 215 aa  152  5.9999999999999996e-36  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  38.99 
 
 		 221 aa  151  7e-36  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  36.02 
 
 		 216 aa  150  1e-35  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  39.23 
 
 		 217 aa  150  1e-35  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  37.62 
 
 		 232 aa  150  1e-35  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  41.04 
 
 		 222 aa  150  1e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  37.16 
 
 		 212 aa  150  1e-35  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  39.63 
 
 		 215 aa  150  2e-35  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  38.03 
 
 		 218 aa  150  2e-35  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.972408 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  38.6 
 
 		 250 aa  150  2e-35  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  41.12 
 
 		 217 aa  149  2e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  44.65 
 
 		 211 aa  150  2e-35  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  38.99 
 
 		 233 aa  149  2e-35  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  35.71 
 
 		 215 aa  150  2e-35  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  39.71 
 
 		 212 aa  149  2e-35  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
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