| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_01515 |
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| Symbol | |
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| ID | 6306801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3404317 |
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| End bp | 3404964 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642640551 |
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| Product | transcriptional regulator LuxR/uhpA family |
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| Protein accession | YP_001914407 |
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| Protein GI | 188577478 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.422594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCATCA GAGTTTTTCT GATCGACGAT CATGCGCTCG TGCGTACAGG CATGAAGATG
ATTCTGTCCA AGGAAGTGGA TGTCTGTGTG GTCGGCGAGG CAGAAAGCGG CGAAGCCGCA
TTGCCGCAAA TTCGTCAACT CAAGCCGGAC ATCGTGCTGT GCGACCTGCA TTTGCCTGGC
GTCAGTGGCC TGGAAATCAC CGAGCGCATC GTCAAGGGCG ATTACGGCAC CCGCGTCATC
ATTGTCTCCG TGCTCGAAGA CGGCCCGCTC CCCAAGCGAC TGCTCGAAGC GGGTGCGTCC
GGCTATGTGG GCAAGGGCGG CGACGCGCAC GAGCTGCTGC GCGCGGTACG TGAAGTCGCG
CTGGGGCGGC GTTATCTCGG CAACACGATC GCGCAGAACC TGGCGCTATC CAATCTGGAA
GGGGGGGGCT CACCGTTCGA TGCATTGTCC CCACGCGAGC TGGAAGTGGC CTTGCTGTTG
ACTCAGGGTC TGCGCCAGGA AGACATCGCC AAGCGCCTGA ACCTCAGCGC CAAGACCATC
AATACGCACA AAGCGCGCTT GTTCGAAAAG GTCGGCATCC AGGACAACAT CGCGCTGGCA
CGGTTGGCCA ACCAGTATGG CCTGACCGAT CCCTCCAGGG TGCTGTGA
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| Protein sequence | MTIRVFLIDD HALVRTGMKM ILSKEVDVCV VGEAESGEAA LPQIRQLKPD IVLCDLHLPG
VSGLEITERI VKGDYGTRVI IVSVLEDGPL PKRLLEAGAS GYVGKGGDAH ELLRAVREVA
LGRRYLGNTI AQNLALSNLE GGGSPFDALS PRELEVALLL TQGLRQEDIA KRLNLSAKTI
NTHKARLFEK VGIQDNIALA RLANQYGLTD PSRVL
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