| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3406 |
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| Symbol | |
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| ID | 8021091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3596332 |
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| End bp | 3596976 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644832200 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_002983342 |
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| Protein GI | 241664982 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.588591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGC ATTCACCCAT GCCCGTCAAA CTGCTCCTCG TCGACGACCA CCCGCTCGTG
CGCGATGGCG TGCGCGTGCG GCTGGAAGCC GTGCCGCATT TCGAAGTGGT GGGTGAAGCC
GGCGACGCAG AAGCCGCCCT GGAGGCCGCG CGCACCTTGG CCCCCGATCT GGCGCTGATG
GACATCGGCA TGCGCGGTAT GAACGGCATC GCGCTCACCG AGAAGTTTGC CGAGGAATTT
CCCGAGATCG CCGTGCTGGT GCTGTCGATG CACGACAACC TGGAGTACGT GCGGCAGGTG
ATCCGCGCCG GCGCGCGTGG CTACGTGCTC AAGGACGCCC CCGCCAGCGA GCTGGTCGAA
GCCATCGACG CCGTGCTGGC CGGCCGGCCC TTCTACAGCG CGCAGCTGGC GATGCGCATG
GCCGAGCAGG CCGTCATGCC CACGCCTGTG GAGGCACTCA CGCCGCGCGA GCGCGACATC
CTCGACGGCA TCGCCAAGGG CTATGCCAAC AAGCGCATCG CCGACGAGCT GGGCTTGTCC
GTGCGTACGG TGGAATCGCA CCGCCTGAAC CTCAAGCGCA AACTCGGCAT CGAGGGGCAG
GCAGAACTGG TGAAGTTTGC GGTGGAGCTG GGAAAGGGCC GTTAG
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| Protein sequence | MNMHSPMPVK LLLVDDHPLV RDGVRVRLEA VPHFEVVGEA GDAEAALEAA RTLAPDLALM
DIGMRGMNGI ALTEKFAEEF PEIAVLVLSM HDNLEYVRQV IRAGARGYVL KDAPASELVE
AIDAVLAGRP FYSAQLAMRM AEQAVMPTPV EALTPRERDI LDGIAKGYAN KRIADELGLS
VRTVESHRLN LKRKLGIEGQ AELVKFAVEL GKGR
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