| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4516 |
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| Symbol | |
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| ID | 4041375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1121351 |
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| End bp | 1121995 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979938 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_586650 |
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| Protein GI | 94313441 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0463384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0270495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGCG TGATCATTGC AGACGATCAC ACTGTGGTGC GCAACGGATT GCGCCATATC
CTCGAACGCA CCAGCGACTT CGAGGTGGTT GGCGAAGCAG CCCGCGGTAC CGAAGTGCCA
CAACTCGTGC GCGAGCTGTC GCCGCATGTC ATCCTGCTGG ACCTGTCGAT GCCCGGCCGG
AACGGGCTGG AACTGATCCG GCAGCTGCGG ACCGATCATC CGGCACTACG AATCCTCGTG
CTGACGATGC ACGCGGAGGA ACAGTATGTG GTCCGCGCCT TCCGTGCCGG CGCGGCTGGC
TACCTGACCA AGGAAAGCGC GGCGACAGAA CTGGTGGAGG CGCTGAGGAA GGTGGCCGCG
GGCGGCACCT ACGTCAGCCC CGCCATGGCC GAAAAGCTGG CGCTGGGCCT GCAGGAAAAG
CCCGATGCGC CGCACGAGGG CCTGTCGGAT CGTGAACTCG AGGTCTTCCG GCGCATCGTC
GACGGCGAGT CGCTCACGCA GATCGCCGCC GCGCTGTGCG TCAGCGCCAA GACGGTCAGC
ACCTACAAGA TGCGCCTGAT GGAAAAACTC CAGCTTCGCA GCGACGCCGC GCTGGTCCGC
TATGCGATCG AGGCGAGGCT GTTCGGCGAC GAAGACAAGC TATAG
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| Protein sequence | MIRVIIADDH TVVRNGLRHI LERTSDFEVV GEAARGTEVP QLVRELSPHV ILLDLSMPGR
NGLELIRQLR TDHPALRILV LTMHAEEQYV VRAFRAGAAG YLTKESAATE LVEALRKVAA
GGTYVSPAMA EKLALGLQEK PDAPHEGLSD RELEVFRRIV DGESLTQIAA ALCVSAKTVS
TYKMRLMEKL QLRSDAALVR YAIEARLFGD EDKL
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