More than 300 homologs were found in PanDaTox collection
for query gene Rmar_2227 on replicon NC_013501
Organism: Rhodothermus marinus DSM 4252



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  100 
 
 		 217 aa  432  1e-120  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  51.85 
 
 		 229 aa  230  1e-59  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_010571  Oter_0043  two component LuxR family transcriptional regulator  50.23 
 
 		 234 aa  230  1e-59  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.14113 
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  50 
 
 		 224 aa  206  3e-52  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal  1 
 
 
-
 
NC_010571  Oter_3239  two component LuxR family transcriptional regulator  47.47 
 
 		 274 aa  204  7e-52  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B5451  two component LuxR family transcriptional regulator  49.76 
 
 		 223 aa  201  9.999999999999999e-51  Ralstonia eutropha JMP134  Bacteria  normal  0.761649  n/a   
 
 
-
 
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  44.86 
 
 		 234 aa  192  4e-48  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
NC_013501  Rmar_1123  two component transcriptional regulator, LuxR family  46.63 
 
 		 242 aa  189  2e-47  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A0728  two component LuxR family transcriptional regulator  42.92 
 
 		 217 aa  177  1e-43  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  41.51 
 
 		 222 aa  167  1e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  41.71 
 
 		 215 aa  164  5.9999999999999996e-40  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  41.04 
 
 		 221 aa  165  5.9999999999999996e-40  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_4250  two component LuxR family transcriptional regulator  42.25 
 
 		 246 aa  164  8e-40  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.59923 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  44.66 
 
 		 217 aa  162  3e-39  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  41.75 
 
 		 215 aa  161  6e-39  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  41.75 
 
 		 215 aa  161  6e-39  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  41.75 
 
 		 215 aa  161  6e-39  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  41.75 
 
 		 215 aa  161  6e-39  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  41.75 
 
 		 215 aa  161  6e-39  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  41.75 
 
 		 215 aa  161  6e-39  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  41.26 
 
 		 215 aa  160  1e-38  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  41.75 
 
 		 215 aa  160  1e-38  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  42.58 
 
 		 211 aa  159  4e-38  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  42.23 
 
 		 210 aa  158  5e-38  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  40.78 
 
 		 218 aa  157  1e-37  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.972408 
 
 
-
 
NC_010524  Lcho_1400  two component LuxR family transcriptional regulator  45.32 
 
 		 205 aa  156  3e-37  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  44.17 
 
 		 210 aa  155  5.0000000000000005e-37  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  43.69 
 
 		 210 aa  154  8e-37  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  40.29 
 
 		 214 aa  154  8e-37  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  40.29 
 
 		 214 aa  154  8e-37  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  40.29 
 
 		 214 aa  154  8e-37  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  46.08 
 
 		 235 aa  154  9e-37  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  41.26 
 
 		 214 aa  153  1e-36  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  40.29 
 
 		 214 aa  154  1e-36  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  41.75 
 
 		 210 aa  154  1e-36  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  40.19 
 
 		 220 aa  154  1e-36  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  43.69 
 
 		 210 aa  153  2e-36  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  39.91 
 
 		 231 aa  153  2e-36  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  42.72 
 
 		 214 aa  153  2e-36  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  40.29 
 
 		 214 aa  153  2e-36  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  38.76 
 
 		 215 aa  152  2.9999999999999998e-36  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  40.1 
 
 		 216 aa  152  2.9999999999999998e-36  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  40 
 
 		 210 aa  152  2.9999999999999998e-36  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  39.72 
 
 		 213 aa  152  4e-36  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  37.14 
 
 		 212 aa  152  5e-36  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
NC_009485  BBta_4639  two component LuxR family transcriptional regulator  45.37 
 
 		 205 aa  151  8.999999999999999e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.84039  normal  0.0702904 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  39.61 
 
 		 214 aa  150  1e-35  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  40.87 
 
 		 210 aa  150  1e-35  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  40.87 
 
 		 210 aa  150  1e-35  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  44.93 
 
 		 214 aa  150  1e-35  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_013173  Dbac_2295  two component transcriptional regulator, LuxR family  40.28 
 
 		 222 aa  150  1e-35  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.031577  n/a   
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  40.48 
 
 		 214 aa  149  2e-35  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  40.58 
 
 		 214 aa  149  3e-35  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  43.14 
 
 		 213 aa  149  4e-35  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  41.15 
 
 		 215 aa  148  6e-35  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  41.15 
 
 		 215 aa  148  6e-35  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  41.15 
 
 		 215 aa  148  6e-35  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  39.81 
 
 		 210 aa  148  7e-35  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  39.9 
 
 		 211 aa  147  8e-35  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  42.79 
 
 		 213 aa  147  1.0000000000000001e-34  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  40.29 
 
 		 213 aa  147  1.0000000000000001e-34  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  38.35 
 
 		 210 aa  147  1.0000000000000001e-34  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  38.39 
 
 		 217 aa  147  2.0000000000000003e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  40.89 
 
 		 220 aa  145  3e-34  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  40.78 
 
 		 214 aa  146  3e-34  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.10411 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  39.02 
 
 		 213 aa  144  7.0000000000000006e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  35.85 
 
 		 223 aa  144  8.000000000000001e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  38.22 
 
 		 224 aa  144  1e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  40.38 
 
 		 213 aa  143  2e-33  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  36.32 
 
 		 213 aa  143  2e-33  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.3 
 
 		 215 aa  143  2e-33  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  40.38 
 
 		 213 aa  143  2e-33  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_007492  Pfl01_5126  two component LuxR family transcriptional regulator  37.68 
 
 		 209 aa  142  3e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.135043  normal  0.384971 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  40.78 
 
 		 219 aa  142  3e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_010814  Glov_1565  two component transcriptional regulator, LuxR family  39.9 
 
 		 214 aa  142  4e-33  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  36.41 
 
 		 214 aa  142  4e-33  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  40.19 
 
 		 220 aa  142  5e-33  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  40.78 
 
 		 214 aa  142  5e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_010505  Mrad2831_0320  two component LuxR family transcriptional regulator  39.13 
 
 		 221 aa  141  7e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.15389  normal  1 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  39.61 
 
 		 213 aa  141  7e-33  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  41.06 
 
 		 215 aa  141  7e-33  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_011891  A2cp1_2172  two component transcriptional regulator, LuxR family  43.69 
 
 		 210 aa  141  7e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_6075  two-component response regulator  38.83 
 
 		 216 aa  141  8e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  37.38 
 
 		 232 aa  141  8e-33  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  37.86 
 
 		 232 aa  141  9.999999999999999e-33  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  39.15 
 
 		 220 aa  139  1.9999999999999998e-32  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  40.58 
 
 		 225 aa  139  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal  1 
 
 
-
 
NC_007404  Tbd_1588  two component LuxR family transcriptional regulator  40.29 
 
 		 215 aa  140  1.9999999999999998e-32  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.731747  normal  0.987016 
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  39.32 
 
 		 215 aa  139  1.9999999999999998e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  40.58 
 
 		 214 aa  140  1.9999999999999998e-32  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  35.89 
 
 		 210 aa  140  1.9999999999999998e-32  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0301144 
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  39.32 
 
 		 215 aa  139  1.9999999999999998e-32  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_010676  Bphyt_4476  two component transcriptional regulator, LuxR family  40.19 
 
 		 215 aa  139  1.9999999999999998e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  38.83 
 
 		 215 aa  140  1.9999999999999998e-32  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_007778  RPB_4449  two component LuxR family transcriptional regulator  35.21 
 
 		 230 aa  139  1.9999999999999998e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.683214 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  38.89 
 
 		 216 aa  139  1.9999999999999998e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  38.05 
 
 		 216 aa  139  1.9999999999999998e-32  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  39.32 
 
 		 215 aa  139  1.9999999999999998e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_3060  two component transcriptional regulator, LuxR family  37.98 
 
 		 215 aa  139  1.9999999999999998e-32  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  34.6 
 
 		 218 aa  139  3e-32  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
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