Gene SERP1981 details

Gene Information

• Locus tag: SERP1981
• ID: 3242433
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 1998976
• End bp: 1999632
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637168667
• Product: transcriptional regulatory protein DegU, putative
• Protein accession: YP_189537
• Protein GI: 57865448
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAATAG TTATAGCGGA TGACCATGCA GTTGTTAGGA CAGGATTTTC AATGATATTA 
AATTATCAAG AAGATATGGA AGTTGTTGCA ACTGCAGCTG ACGGGGTTGA AGCTTATCAA 
AAAGTGTTAG AACATCGACC AGATGTTTTA ATTTTAGATT TGAGCATGCC GCCAGGAGAG 
TCAGGCTTAA TCGCAACCAG TAAAATTTCT GAAAGTTTTC CTGATACTAA AATTTTAATA 
CTTACGATGT TTGATGACGA AGAATATTTA TTTCATGTGT TAAAAAGTGG TGCTAAAGGA 
TACATTTTAA AAAATTCACC TGATGAGCAA TTAATATTGG CCGTACGTAC AGTATATCAA 
GGTGAAACTT ATGTTGATAT GAAATTGACG ACGTCTTTAG TCAATGAGTT TGTCAATCAA 
TCACAAACGG ATGAAGTGTC ATCATCTTCA GATCCATTTA AAATTTTATC GAAACGAGAG 
TTAGAAATAT TACCTCTTAT AGCAAAAGGC TATGGCAATA AAGATATTGC AGAAAAGTTG 
TTTGTATCGG TGAAAACGGT AGAGGCACAT AAAACGCATA TTATGACGAA ACTAAATTTA 
AAGAGTAAAC CTGAATTAGT TGAATATGCC TTAAAGAAAA AATTATTAGA ATTTTAA 

 

Protein sequence

MKIVIADDHA VVRTGFSMIL NYQEDMEVVA TAADGVEAYQ KVLEHRPDVL ILDLSMPPGE 
SGLIATSKIS ESFPDTKILI LTMFDDEEYL FHVLKSGAKG YILKNSPDEQ LILAVRTVYQ 
GETYVDMKLT TSLVNEFVNQ SQTDEVSSSS DPFKILSKRE LEILPLIAKG YGNKDIAEKL 
FVSVKTVEAH KTHIMTKLNL KSKPELVEYA LKKKLLEF