More than 300 homologs were found in PanDaTox collection
for query gene Msil_2019 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  100 
 
 		 223 aa  437  9.999999999999999e-123  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  62.39 
 
 		 228 aa  273  1.0000000000000001e-72  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  62.67 
 
 		 228 aa  273  2.0000000000000002e-72  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  61.93 
 
 		 228 aa  271  8.000000000000001e-72  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_3790  two component LuxR family transcriptional regulator  60.18 
 
 		 226 aa  258  3e-68  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4449  two component LuxR family transcriptional regulator  57.55 
 
 		 230 aa  255  5e-67  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.683214 
 
 
-
 
NC_007958  RPD_2401  response regulator receiver  57.55 
 
 		 230 aa  251  7e-66  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0808908 
 
 
-
 
NC_009485  BBta_3079  two component LuxR family transcriptional regulator  60 
 
 		 233 aa  249  3e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_3423  two component transcriptional regulator, LuxR family  56.02 
 
 		 235 aa  243  1.9999999999999999e-63  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.324081  n/a   
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  55.45 
 
 		 220 aa  228  5e-59  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  53.05 
 
 		 222 aa  228  8e-59  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  51.17 
 
 		 221 aa  220  9.999999999999999e-57  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  46.73 
 
 		 223 aa  194  1e-48  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  44.5 
 
 		 217 aa  181  1e-44  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  46.19 
 
 		 213 aa  180  1e-44  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  44.5 
 
 		 213 aa  180  2e-44  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0851  two component transcriptional regulator, LuxR family  44.34 
 
 		 232 aa  179  4e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  44.34 
 
 		 218 aa  174  7e-43  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  42.06 
 
 		 215 aa  171  6.999999999999999e-42  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_4860  two component transcriptional regulator, LuxR family  44.69 
 
 		 236 aa  171  7.999999999999999e-42  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.142587 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  42.11 
 
 		 214 aa  171  9e-42  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_014148  Plim_3764  response regulator receiver  42.13 
 
 		 217 aa  165  5e-40  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.321181  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  42.92 
 
 		 218 aa  163  2.0000000000000002e-39  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  42.45 
 
 		 218 aa  162  4.0000000000000004e-39  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  42.45 
 
 		 218 aa  162  4.0000000000000004e-39  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  44.5 
 
 		 212 aa  162  4.0000000000000004e-39  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4442  response regulator receiver domain-containing protein  62.7 
 
 		 172 aa  162  5.0000000000000005e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.591595 
 
 
-
 
NC_010172  Mext_4343  response regulator receiver  43.78 
 
 		 236 aa  160  2e-38  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_4712  two component transcriptional regulator, LuxR family  43.78 
 
 		 236 aa  160  2e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.37561  normal  1 
 
 
-
 
NC_010725  Mpop_0347  two component transcriptional regulator, LuxR family  42.72 
 
 		 222 aa  160  2e-38  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_1668  response regulator receiver  42.72 
 
 		 222 aa  159  2e-38  Methylobacterium extorquens PA1  Bacteria  normal  0.679138  normal  1 
 
 
-
 
NC_011757  Mchl_1985  two component transcriptional regulator, LuxR family  42.72 
 
 		 222 aa  159  3e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_2393  response regulator receiver  59.69 
 
 		 172 aa  159  3e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.820012  normal  0.124287 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  40.19 
 
 		 206 aa  158  5e-38  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  36.02 
 
 		 212 aa  157  1e-37  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  36.67 
 
 		 222 aa  155  5.0000000000000005e-37  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  41.12 
 
 		 228 aa  155  5.0000000000000005e-37  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  37.8 
 
 		 218 aa  154  8e-37  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  40.67 
 
 		 218 aa  154  9e-37  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  37.8 
 
 		 216 aa  152  2.9999999999999998e-36  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  41.12 
 
 		 214 aa  152  2.9999999999999998e-36  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  36.79 
 
 		 224 aa  152  2.9999999999999998e-36  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  36.79 
 
 		 224 aa  152  5e-36  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  36.32 
 
 		 216 aa  152  5e-36  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  38.28 
 
 		 215 aa  151  8e-36  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  36.32 
 
 		 224 aa  150  1e-35  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  36.32 
 
 		 224 aa  150  1e-35  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  37.68 
 
 		 215 aa  150  1e-35  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  36.79 
 
 		 212 aa  149  3e-35  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_011146  Gbem_2253  two component transcriptional regulator, LuxR family  35.98 
 
 		 216 aa  149  4e-35  Geobacter bemidjiensis Bem  Bacteria  normal  0.174263  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  36.97 
 
 		 216 aa  148  6e-35  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  40.29 
 
 		 215 aa  148  6e-35  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  36.84 
 
 		 217 aa  147  1.0000000000000001e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  38.79 
 
 		 219 aa  147  1.0000000000000001e-34  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  38.1 
 
 		 213 aa  147  2.0000000000000003e-34  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  39.35 
 
 		 221 aa  146  2.0000000000000003e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  41.26 
 
 		 218 aa  146  2.0000000000000003e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0183  two component LuxR family transcriptional regulator  40.28 
 
 		 200 aa  145  3e-34  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.541303  normal  0.654013 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  36.49 
 
 		 216 aa  145  5e-34  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  34.5 
 
 		 208 aa  145  7.0000000000000006e-34  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1971  two component transcriptional regulator, LuxR family  36.32 
 
 		 216 aa  144  1e-33  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  35.94 
 
 		 216 aa  143  2e-33  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  40.09 
 
 		 215 aa  144  2e-33  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  39.34 
 
 		 214 aa  143  2e-33  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  36.02 
 
 		 216 aa  143  2e-33  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  37.68 
 
 		 208 aa  143  2e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  36.23 
 
 		 216 aa  142  3e-33  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  36.57 
 
 		 218 aa  142  4e-33  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  39.07 
 
 		 213 aa  142  4e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  37.91 
 
 		 238 aa  141  7e-33  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  35.68 
 
 		 226 aa  141  8e-33  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  35.62 
 
 		 215 aa  141  9e-33  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  37.32 
 
 		 207 aa  141  9e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  35.24 
 
 		 232 aa  141  9.999999999999999e-33  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  37.56 
 
 		 213 aa  140  1.9999999999999998e-32  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  34.55 
 
 		 224 aa  140  1.9999999999999998e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  37.56 
 
 		 213 aa  140  1.9999999999999998e-32  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  35.85 
 
 		 224 aa  139  3e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  32.54 
 
 		 228 aa  139  3.9999999999999997e-32  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  37.02 
 
 		 216 aa  139  3.9999999999999997e-32  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_1290  two component LuxR family transcriptional regulator  36.97 
 
 		 209 aa  138  4.999999999999999e-32  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.542915  normal  1 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  35.55 
 
 		 210 aa  138  4.999999999999999e-32  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  35.81 
 
 		 217 aa  138  6e-32  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  35.81 
 
 		 217 aa  138  6e-32  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  37.09 
 
 		 230 aa  138  7e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  34.22 
 
 		 236 aa  138  8.999999999999999e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_013739  Cwoe_4976  two component transcriptional regulator, LuxR family  37.9 
 
 		 218 aa  137  1e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.289575  normal  0.034027 
 
 
-
 
NC_011769  DvMF_1021  two component transcriptional regulator, LuxR family  37.26 
 
 		 216 aa  137  1e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.794365 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  33.96 
 
 		 232 aa  137  1e-31  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  39.72 
 
 		 214 aa  137  1e-31  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  35.78 
 
 		 243 aa  137  2e-31  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  37.37 
 
 		 212 aa  136  2e-31  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_008255  CHU_1317  response regulator  33.8 
 
 		 220 aa  136  2e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  33.64 
 
 		 214 aa  137  2e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  36.67 
 
 		 213 aa  136  2e-31  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  33.82 
 
 		 217 aa  136  3.0000000000000003e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  37.85 
 
 		 234 aa  136  3.0000000000000003e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.683883 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  38.39 
 
 		 209 aa  135  4e-31  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  37.91 
 
 		 220 aa  135  4e-31  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  34.43 
 
 		 228 aa  135  4e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
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