Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1346 |
Symbol | |
ID | 7268638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1667101 |
End bp | 1667811 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643566189 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_002462689 |
Protein GI | 219848256 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.361751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000337078 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGACAGCAC CGCTAACGAT AAAAGTCTTG GTGATCGATG ACCACCCGCT CTTCCGGCAG GGGATCCGCT GGAGTCTGGA GAGTGCCCCT GATATAGAAG TGGTGGGAGA AGCCGAAAAC GGTCAAGAAG CGATAAAGCT CACCGAACGC CTCATGCCCG ACATAGTGCT CGTCGACATC AATCTACCCG GCTTAAATGG GTTGGAAGTG GCACGGGTAA TCAAGCGTCG TGAACCACGG ACGGGGATTA TCGTGCTTAG TGTCTATGAA GACGACGATC AGTTGTTCCA AGCCATTAAG GTGGGGGCAG CCGCTTTTAC ATCAAAAGAC ATTAGTCCTG ATGAATTAGT GCAGATGATC CGTGAGGTTG CGCGCGGGCG CTACTTAATC AACGATGCAG TGCTGGCCCG TCCTAACGTG GCAGCCCGGG TCTTACACCA ATTCCGCGAA CTCGCTGCAA CCGAAGAGGA AGATAGCGCG AGTCTCTTCG CGCCCCTCAC GTCACGTGAG ATTGAGATTC TTGACTGTAT CGCCCGCGGT CTCTCGAATA AAGAAATTGC GAACGAATTG AGTATTAGCG GGCAGACCGT TAAGAATCAC ATTACCTCTA TTTTGTCGAA ACTCCAAGTC AACGACCGCA CGATGGCGGT GATCGTCGCG ATTAAGAAGG GATGGATCAA GATGGGGTAT TCGCAACCGC CTGAAGGATA A
|
Protein sequence | MTAPLTIKVL VIDDHPLFRQ GIRWSLESAP DIEVVGEAEN GQEAIKLTER LMPDIVLVDI NLPGLNGLEV ARVIKRREPR TGIIVLSVYE DDDQLFQAIK VGAAAFTSKD ISPDELVQMI REVARGRYLI NDAVLARPNV AARVLHQFRE LAATEEEDSA SLFAPLTSRE IEILDCIARG LSNKEIANEL SISGQTVKNH ITSILSKLQV NDRTMAVIVA IKKGWIKMGY SQPPEG
|
| |