Gene Nther_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2325 
Symbol 
ID6315918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2470498 
End bp2471184 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content36% 
IMG OID642644712 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_001918478 
Protein GI188586933 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA TGGATGAAAA TAAAACAATC CGCATTCTTT TAGCTGATGA CCATGCACTG 
TTTAGGCAAG GACTTAAAAA AATACTCGAC ATGGAAGAAG ATTTGGCAGT ATGTGGTGAA
GCACAAAATG GAGAAGAAGT GGTAGATAAA GTTAAACTAC TAAAACCTAA TATAATTTTA
ATGGATATTA ATATGCCTTT ATTAAATGGA GTGGAAGCTA CTAAATACGT AAAAGAAGTT
TCTCCTGAAA CTAAAGTGAT TGCACTGACC ATTCACGAAG ATGAAGAATA TCTCTTCGAA
ATAGTCAAAG AGGGAGCTGC AGGGTTCTTG TTAAAAGATG TGGAAACACC TACCCTTGTA
CAAGCCATTC AGGAAGTTAA TAAAGGTAAT TCTTTTATCC ATCCTACTAT TACCCACAAG
CTCCTTGGCG AATTTAATCG CCTGGCACAG AATTCTCCCA GAAATATTAA ATCCGATGAA
GCAGTGCAAT CAGAATTAAC TGGTAGGGAG AAAGAGATTT TAGAGTTAAT GGCCCAGGGA
TACACCAATA AAGAAATATC CAAAGAACTA TACATATCAG AGAAGACAGT CAAGAACCAT
GTATCAAATA TTTTACGGAA AATGGATGTA ACAGATCGAA CACAAGCAGT TATAACTGCT
CTAAAATGTG GTGTAGTGCA AATTTAG
 
Protein sequence
MKTMDENKTI RILLADDHAL FRQGLKKILD MEEDLAVCGE AQNGEEVVDK VKLLKPNIIL 
MDINMPLLNG VEATKYVKEV SPETKVIALT IHEDEEYLFE IVKEGAAGFL LKDVETPTLV
QAIQEVNKGN SFIHPTITHK LLGEFNRLAQ NSPRNIKSDE AVQSELTGRE KEILELMAQG
YTNKEISKEL YISEKTVKNH VSNILRKMDV TDRTQAVITA LKCGVVQI