Gene RPB_4442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4442 
Symbol 
ID3912257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5029307 
End bp5029825 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID637886344 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_488036 
Protein GI86751540 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.591595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGTC GAACAACACC CCGCCTGCGC GTCTTCCTGG CCGACGACCA CCCGCTCGTG 
CTCCGCGGCA TGAAGATGCT GATCGGGAAC GACGCCGGCC TGGAACTCGT CGGCGACGCC
TCCGACGGAC CGAGCGCACT CCAGCGCGCG ATCGAATTGA AGCCGGATGT CGCGGTCCTC
GACCTGTGGA TGCCGGGTCT CAGAGGGCTG GATGTCGCCC GCCAGTTTCT GTCGATCTGC
CCGACATCCC GCGTGCTGGT GCTGACGGTC CACGAAGACG CGGCCTATCT GCGCAAGGTC
CTGCAATGTG GCGTGACCGG CTACATTCTC AAACGCTCGG CGACCGACGA GCTCGCTCGC
GGCATCCACG CGGTGGCGGC CGGAGGTCTT TATCTGGATC CGCACTTCCT GGCCGACAGG
ACCGACGGGG AGTTGATTCT CCGGCAGTCG GCCCGGCGGG TGGGACTCAA CCTCTTCATC
GAGACCGTCG ACAATCTGAA GCGGAACAGC ATCCACTAG
 
Protein sequence
MDGRTTPRLR VFLADDHPLV LRGMKMLIGN DAGLELVGDA SDGPSALQRA IELKPDVAVL 
DLWMPGLRGL DVARQFLSIC PTSRVLVLTV HEDAAYLRKV LQCGVTGYIL KRSATDELAR
GIHAVAAGGL YLDPHFLADR TDGELILRQS ARRVGLNLFI ETVDNLKRNS IH