Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_29940 |
Symbol | |
ID | 8634628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3323558 |
End bp | 3324262 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003315729 |
Protein GI | 269796274 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.683883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCA CACCGCAGAG CCCGCGTCCC GACCAGGAGC CCAGCACGCG AGCAGGCGCC CCGAGCGAGC CCGAGCGCCC CACCGTCAGG GTCGTGGTCG CGGACGACCA CCCCGTCGTC CGCGCGGGCA TCGTCGGGAT GCTCGGCGTC GAGAGCGACA TCGAGGTGGT GGGCGAGGCC GAGGACGGCC GCCAGGCGGT CGACCTCGCC CGCACCCTGT CGCCCGACGT CGTCATCACC GACCTGCGGA TGCCCGTCCT CGACGGGGTC GGGGCCACCC GGGAGATCGT GGCGCTCCCG GGGACGGTGC GCGTGGTGGT GCTGACGACC TACGAGACGG ACGGCGAGAT CCTGCGGGCC GTCGAGGCGG GGGCCACCGG CTACCTGCTC AAGGACACCC CGCGGGCCGA GCTCGTCGCC GGGATCCGCG AGGCCGCCCG GGGGCAGACG GTGCTCACAC CGTCGGTCGC GACCCGGCTG GTGAGCCAGG TCGGCTCCCG TGCCGACAGG CTCACCCCGC GCGAGGTCGA GGTGCTGCGC GCGGTCGCGC GCGGGCTGAG CAACGCGGCC GTCGGGCACG AGCTGTTCAT CTCCGAGACG ACCGTGAAGA CGCACCTCAT CCGGGCCTTC GGCAAGCTGG GCGTCAACGA CCGGACGCAC GCCGTCACCG TGGCGACGGA CCGCGGCCTG CTCGGGCAGG TGTGA
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Protein sequence | MTSTPQSPRP DQEPSTRAGA PSEPERPTVR VVVADDHPVV RAGIVGMLGV ESDIEVVGEA EDGRQAVDLA RTLSPDVVIT DLRMPVLDGV GATREIVALP GTVRVVVLTT YETDGEILRA VEAGATGYLL KDTPRAELVA GIREAARGQT VLTPSVATRL VSQVGSRADR LTPREVEVLR AVARGLSNAA VGHELFISET TVKTHLIRAF GKLGVNDRTH AVTVATDRGL LGQV
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