More than 300 homologs were found in PanDaTox collection
for query gene Gbem_2253 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011146  Gbem_2253  two component transcriptional regulator, LuxR family  100 
 
 		 216 aa  439  9.999999999999999e-123  Geobacter bemidjiensis Bem  Bacteria  normal  0.174263  n/a   
 
 
-
 
NC_012918  GM21_1971  two component transcriptional regulator, LuxR family  86.79 
 
 		 216 aa  380  1e-105  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  42.72 
 
 		 216 aa  186  2e-46  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  38.6 
 
 		 216 aa  168  6e-41  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  38.14 
 
 		 216 aa  168  6e-41  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  40.95 
 
 		 215 aa  164  1.0000000000000001e-39  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  40.19 
 
 		 206 aa  162  3e-39  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  40.47 
 
 		 218 aa  158  6e-38  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  40.09 
 
 		 226 aa  157  8e-38  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  40 
 
 		 214 aa  155  3e-37  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  36.49 
 
 		 219 aa  155  3e-37  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  40.55 
 
 		 221 aa  155  6e-37  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  36.79 
 
 		 216 aa  154  1e-36  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_003295  RSc0192  response regulator transcription regulator protein  36.45 
 
 		 215 aa  153  2e-36  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.028731 
 
 
-
 
NC_010678  Rpic_4426  two component transcriptional regulator, LuxR family  36.92 
 
 		 215 aa  153  2e-36  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  41.01 
 
 		 232 aa  153  2e-36  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012857  Rpic12D_4559  two component transcriptional regulator, LuxR family  36.92 
 
 		 215 aa  153  2e-36  Ralstonia pickettii 12D  Bacteria  normal  0.0669727  normal  0.0839611 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  41.01 
 
 		 232 aa  153  2e-36  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  38.57 
 
 		 214 aa  152  2.9999999999999998e-36  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_013739  Cwoe_1233  two component transcriptional regulator, LuxR family  35.71 
 
 		 220 aa  152  5e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.681342  normal  0.792953 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  39.05 
 
 		 220 aa  152  5e-36  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  38.1 
 
 		 218 aa  151  5.9999999999999996e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  1 
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  40.09 
 
 		 214 aa  150  1e-35  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  35.02 
 
 		 220 aa  150  1e-35  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_008609  Ppro_2713  two component LuxR family transcriptional regulator  39.71 
 
 		 208 aa  150  1e-35  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  39.91 
 
 		 232 aa  150  2e-35  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  40.65 
 
 		 215 aa  150  2e-35  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  37.38 
 
 		 218 aa  149  2e-35  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  38.1 
 
 		 219 aa  149  3e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  39.15 
 
 		 217 aa  149  3e-35  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  35.98 
 
 		 223 aa  149  4e-35  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  35.75 
 
 		 216 aa  148  7e-35  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  36.54 
 
 		 215 aa  148  7e-35  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_011145  AnaeK_2078  two component transcriptional regulator, LuxR family  37.32 
 
 		 210 aa  148  7e-35  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  36.32 
 
 		 212 aa  147  9e-35  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  36.19 
 
 		 264 aa  147  9e-35  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_1762  two component LuxR family transcriptional regulator  37.32 
 
 		 210 aa  147  1.0000000000000001e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  40.19 
 
 		 213 aa  146  2.0000000000000003e-34  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  38.14 
 
 		 213 aa  146  3e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_3523  two component LuxR family transcriptional regulator  39.61 
 
 		 224 aa  145  4.0000000000000006e-34  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  37.85 
 
 		 215 aa  145  5e-34  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  37.85 
 
 		 215 aa  145  5e-34  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  37.85 
 
 		 215 aa  145  5e-34  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  38.32 
 
 		 223 aa  144  8.000000000000001e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  38.39 
 
 		 218 aa  144  8.000000000000001e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  38.57 
 
 		 218 aa  144  1e-33  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  35.24 
 
 		 210 aa  144  1e-33  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0301144 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  40 
 
 		 212 aa  144  1e-33  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  37.62 
 
 		 217 aa  144  1e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  38.57 
 
 		 218 aa  144  1e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  34.4 
 
 		 223 aa  143  2e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_011891  A2cp1_2172  two component transcriptional regulator, LuxR family  37.14 
 
 		 210 aa  143  2e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  36.02 
 
 		 215 aa  143  2e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  35.71 
 
 		 224 aa  142  3e-33  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  35.71 
 
 		 224 aa  142  3e-33  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  36.57 
 
 		 244 aa  142  3e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  36.79 
 
 		 212 aa  142  3e-33  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  38.94 
 
 		 208 aa  142  3e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  35.05 
 
 		 216 aa  142  4e-33  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  36.02 
 
 		 216 aa  142  4e-33  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  38.57 
 
 		 213 aa  142  4e-33  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  34.88 
 
 		 219 aa  142  4e-33  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  37.44 
 
 		 222 aa  142  4e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  36.67 
 
 		 214 aa  142  4e-33  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  34.26 
 
 		 238 aa  142  5e-33  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  35.58 
 
 		 210 aa  141  7e-33  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  33.17 
 
 		 214 aa  141  8e-33  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  37.62 
 
 		 218 aa  141  8e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  36.84 
 
 		 210 aa  140  9.999999999999999e-33  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  35.24 
 
 		 224 aa  140  9.999999999999999e-33  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_011831  Cagg_3359  two component transcriptional regulator, LuxR family  38.03 
 
 		 219 aa  140  9.999999999999999e-33  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00321115  hitchhiker  0.000132937 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  36.71 
 
 		 216 aa  140  9.999999999999999e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  35.38 
 
 		 215 aa  140  9.999999999999999e-33  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  35.24 
 
 		 224 aa  140  1.9999999999999998e-32  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  38.39 
 
 		 210 aa  140  1.9999999999999998e-32  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  36.49 
 
 		 216 aa  140  1.9999999999999998e-32  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  33.96 
 
 		 216 aa  139  3e-32  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  36.84 
 
 		 210 aa  139  3e-32  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  35.71 
 
 		 213 aa  139  3e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  35.55 
 
 		 221 aa  139  3.9999999999999997e-32  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_2635  two component transcriptional regulator, LuxR family  35.24 
 
 		 217 aa  139  3.9999999999999997e-32  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000528497  hitchhiker  0.00476816 
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  36.49 
 
 		 215 aa  139  3.9999999999999997e-32  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  36.36 
 
 		 210 aa  138  6e-32  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  35.58 
 
 		 213 aa  138  7e-32  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  34.72 
 
 		 221 aa  138  7e-32  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  36.49 
 
 		 219 aa  138  7e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  35.41 
 
 		 228 aa  138  7e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  34.74 
 
 		 217 aa  138  7.999999999999999e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  35.1 
 
 		 210 aa  138  7.999999999999999e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  35.65 
 
 		 218 aa  137  1e-31  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  33.18 
 
 		 215 aa  137  1e-31  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  37.32 
 
 		 228 aa  137  1e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_010622  Bphy_1137  two component LuxR family transcriptional regulator  34.13 
 
 		 214 aa  137  1e-31  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  35.75 
 
 		 215 aa  137  1e-31  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
NC_007492  Pfl01_5126  two component LuxR family transcriptional regulator  37.91 
 
 		 209 aa  137  2e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.135043  normal  0.384971 
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  36.54 
 
 		 210 aa  137  2e-31  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  34.78 
 
 		 215 aa  136  2e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  32.08 
 
 		 215 aa  135  3.0000000000000003e-31  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  33.02 
 
 		 216 aa  136  3.0000000000000003e-31  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009075  BURPS668_A1228  LuxR family DNA-binding response regulator  32.08 
 
 		 215 aa  136  3.0000000000000003e-31  Burkholderia pseudomallei 668  Bacteria  normal  0.0904383  n/a   
 
 
-
 
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