Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2312 |
Symbol | |
ID | 1221157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2512809 |
End bp | 2513525 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637238711 |
Product | two-component response regulator transcription regulator protein |
Protein accession | NP_520433 |
Protein GI | 17547031 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.500036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCG TACATCGCCT GTTGATCGCG GAGGATCATC ATTTGCTCAG GTGTGGTCTG CGATCCATGT TGTCCGCCCT GGGTGAATAC GACGTGGTCG GGGAAGCAAA GGACGGAAGG GAGGCGTGCC AACTGGCCAT CTCGCTGGCC CCGGACCTGG TGCTGACCGA TCTGTCGATG CCCGGCATGA ACGGCATCGA TATGGTGGCG ACGATCAAGC GCCGCCTGCC GCAGATCCGC GTGGTCGTGC TGACCGTCTA CAAGTCGGAA GAGTATGTGA GGGAAGCGCT GCGCGTGGGG GTCGACGGCT ATGTCCTGAA AGATGCGTCG TTCGAGGAAC TGGTGGCTGC GCTGCGCGCG GTCATGCAGG GCAAGCGACA TCTGAGCGCC GATGTCTATG GCAACGTGGT CAAGTCGTTT GTCAATGGTC ATGAGGCACT GGCGCCCAAG AGCACCTGGG AAACGCTGAC CGCGCGCGAG CGCAGCGTGC TGCAGCTCGT GGCCGAAGGC CGGACCAATC GCCAGGTCGG GCTCTACCTG AACCTCAGTC CCAAGACGAT CGAGAAATAC CGCGCGCACC TGATGGAAAA GCTCGGCGTC GGCAATGTGA CCGGGCTGGT GCTTGCCGCG ATCGGCCTGG GCTTGATCGC GCCGCAGTCG GATCTGCAAA GCGACACCAA TATCGAGCCC CCGGCGTATC GCCGTGAGGT GAGGTGA
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Protein sequence | MSTVHRLLIA EDHHLLRCGL RSMLSALGEY DVVGEAKDGR EACQLAISLA PDLVLTDLSM PGMNGIDMVA TIKRRLPQIR VVVLTVYKSE EYVREALRVG VDGYVLKDAS FEELVAALRA VMQGKRHLSA DVYGNVVKSF VNGHEALAPK STWETLTARE RSVLQLVAEG RTNRQVGLYL NLSPKTIEKY RAHLMEKLGV GNVTGLVLAA IGLGLIAPQS DLQSDTNIEP PAYRREVR
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