More than 300 homologs were found in PanDaTox collection
for query gene GYMC61_3240 on replicon NC_013411
Organism: Geobacillus sp. Y412MC61



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  100 
 
 
224 aa  455  1e-127  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  89.78 
 
 
225 aa  386  1e-106  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  47.73 
 
 
228 aa  218  5e-56  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  46.58 
 
 
216 aa  205  4e-52  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  46.33 
 
 
216 aa  204  6e-52  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  44.59 
 
 
213 aa  195  6e-49  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  44.34 
 
 
222 aa  193  2e-48  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  43.18 
 
 
213 aa  189  4e-47  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  43.24 
 
 
211 aa  188  5e-47  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  42.01 
 
 
213 aa  188  5e-47  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000185138 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  45.25 
 
 
215 aa  187  1e-46  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  42.47 
 
 
213 aa  187  1e-46  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  44.09 
 
 
209 aa  186  2e-46  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  45.25 
 
 
215 aa  186  2e-46  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  44.09 
 
 
209 aa  186  2e-46  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  45.25 
 
 
215 aa  186  2e-46  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  44.09 
 
 
209 aa  186  2e-46  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  45.25 
 
 
215 aa  186  2e-46  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  44.09 
 
 
209 aa  186  2e-46  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  45.25 
 
 
215 aa  186  2e-46  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  44.09 
 
 
209 aa  186  2e-46  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000736213 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  45.25 
 
 
215 aa  186  2e-46  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  44.34 
 
 
223 aa  186  2e-46  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  41.63 
 
 
222 aa  186  2e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  42.08 
 
 
241 aa  186  3e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  44.81 
 
 
216 aa  185  4e-46  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  44.8 
 
 
215 aa  185  4e-46  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  43.89 
 
 
215 aa  184  7e-46  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  44.34 
 
 
222 aa  184  8e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  43.89 
 
 
215 aa  184  1.0000000000000001e-45  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  43.89 
 
 
215 aa  182  3e-45  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0759  two component LuxR family transcriptional regulator  42.4 
 
 
217 aa  182  4.0000000000000006e-45  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  46.12 
 
 
211 aa  181  6e-45  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2375  DNA-binding response regulator, LuxR family  42.73 
 
 
209 aa  181  8.000000000000001e-45  Bacillus cereus AH187  Bacteria  normal  0.248491  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  42.41 
 
 
220 aa  181  1e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  43.38 
 
 
242 aa  180  1e-44  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  44.09 
 
 
253 aa  181  1e-44  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  41.52 
 
 
213 aa  179  2e-44  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  45.21 
 
 
227 aa  179  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  40.37 
 
 
220 aa  180  2e-44  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  45.5 
 
 
229 aa  179  2.9999999999999997e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  41.1 
 
 
217 aa  179  2.9999999999999997e-44  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  40.91 
 
 
216 aa  179  4e-44  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  42.27 
 
 
218 aa  179  4e-44  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  40.93 
 
 
208 aa  179  4e-44  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  42.13 
 
 
218 aa  178  4.999999999999999e-44  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  43.4 
 
 
218 aa  178  4.999999999999999e-44  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  40.91 
 
 
224 aa  178  8e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  41.96 
 
 
234 aa  177  1e-43  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  43.64 
 
 
212 aa  176  2e-43  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  42.4 
 
 
225 aa  176  2e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  41.55 
 
 
218 aa  176  3e-43  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  42.15 
 
 
237 aa  175  4e-43  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  41.07 
 
 
234 aa  176  4e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  41.59 
 
 
219 aa  175  5e-43  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  40 
 
 
236 aa  175  6e-43  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_009972  Haur_1563  two component LuxR family transcriptional regulator  39.82 
 
 
257 aa  175  6e-43  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.781509  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  38.43 
 
 
226 aa  175  6e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  43.95 
 
 
225 aa  174  7e-43  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  41.7 
 
 
237 aa  174  8e-43  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  41.1 
 
 
220 aa  174  9.999999999999999e-43  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  39.91 
 
 
250 aa  173  1.9999999999999998e-42  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  42.47 
 
 
215 aa  173  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  43.78 
 
 
219 aa  172  2.9999999999999996e-42  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  42.22 
 
 
220 aa  172  2.9999999999999996e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  43.36 
 
 
225 aa  172  3.9999999999999995e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  42.92 
 
 
225 aa  172  3.9999999999999995e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  43.52 
 
 
217 aa  172  5e-42  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  39.63 
 
 
224 aa  172  5e-42  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  42.33 
 
 
219 aa  171  6.999999999999999e-42  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  41.82 
 
 
210 aa  171  6.999999999999999e-42  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  39.63 
 
 
224 aa  171  1e-41  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  44.29 
 
 
216 aa  170  1e-41  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  41.15 
 
 
214 aa  171  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_009767  Rcas_2258  two component LuxR family transcriptional regulator  41.74 
 
 
254 aa  170  1e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.00245701 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  42.67 
 
 
221 aa  170  2e-41  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.59 
 
 
239 aa  170  2e-41  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  39.17 
 
 
224 aa  169  3e-41  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  39.17 
 
 
224 aa  169  3e-41  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  40.28 
 
 
211 aa  169  3e-41  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  39.82 
 
 
218 aa  169  3e-41  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  42.59 
 
 
221 aa  169  3e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  37.1 
 
 
213 aa  169  4e-41  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  40.55 
 
 
213 aa  169  4e-41  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  39.35 
 
 
220 aa  169  4e-41  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3359  two component transcriptional regulator, LuxR family  43.32 
 
 
219 aa  168  5e-41  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00321115  hitchhiker  0.000132937 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  41.89 
 
 
227 aa  168  5e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  37.77 
 
 
243 aa  168  5e-41  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  41.18 
 
 
214 aa  168  7e-41  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  41.36 
 
 
303 aa  168  7e-41  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_009523  RoseRS_1633  two component LuxR family transcriptional regulator  41.3 
 
 
254 aa  168  7e-41  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  40.99 
 
 
226 aa  168  8e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  42.34 
 
 
217 aa  168  8e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  41.07 
 
 
226 aa  167  9e-41  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_002967  TDE2324  DNA-binding response regulator  39.29 
 
 
217 aa  167  1e-40  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  39.55 
 
 
238 aa  167  1e-40  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  40.54 
 
 
212 aa  167  1e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  42.01 
 
 
215 aa  167  1e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  40.64 
 
 
224 aa  167  1e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  40.18 
 
 
230 aa  167  1e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
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