| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1039 |
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| Symbol | |
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| ID | 3906707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1235124 |
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| End bp | 1235840 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637878372 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_480150 |
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| Protein GI | 86739750 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.135118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCA GTGTCGTGCC GCCGTCGGCC GCTGAAGCCG ACTCCGTCGA GGGCTCCGCG
CTGATCCGGG TCCTCGTAGT AGATGATCAT GAGTTGTTCC TTCAGGGCCT GCAGACGGTC
CTGGAGATCG AGGAGGACAT CAGCGTCGTC GGCCGGGCCG GTAACGGTCA AGAGGCTCTG
ACCTTGGCCT CCGGGACATC GCCGGACATC GTCCTGATGG ATGTCCGGAT GCCGGGCCGG
GACGGGATCG CCGCGGCGGG TGCCATCAAA CGTGCTGTTC CGCGCACGCG TATCGTGATG
CTCACGGTCT CGGACGAGGA GTCTGACCTG TTCGAGGCGA TCAAGGCGGG TGCGGTCGGG
TACCTGCTGA AGTCGATTCC GCCGCACGAG GTGGCCGACG CGGTGCGGGC TGTCCACAAT
GGGCAGAGCC TGATCAGTCC TTCGATGGCA TCGAAGTTGA TGGTCGAGTT CGCCACGATG
GCCCGGGGTA CCGAGGACCG TCCTCGGGCG CACGCCCCGC ACCTGACCGC GCGAGAACTC
GAGGTACTGA AGCTGGTCGC TGAGGGGCGC GCGAACCGCG AGATTGCCCG CAAGCTGTTC
ATCAGTGAGA ACACGGTCAA GAACCACGTT CGTAACATCC TGGACAAACT GCAGCTGCAC
TCGCGGATGG AGGCCGTGAT GTACGCGGTT CGTCAGGGGC TGTTCGACAT CGAGTGA
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| Protein sequence | MTASVVPPSA AEADSVEGSA LIRVLVVDDH ELFLQGLQTV LEIEEDISVV GRAGNGQEAL
TLASGTSPDI VLMDVRMPGR DGIAAAGAIK RAVPRTRIVM LTVSDEESDL FEAIKAGAVG
YLLKSIPPHE VADAVRAVHN GQSLISPSMA SKLMVEFATM ARGTEDRPRA HAPHLTAREL
EVLKLVAEGR ANREIARKLF ISENTVKNHV RNILDKLQLH SRMEAVMYAV RQGLFDIE
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