Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1563 |
Symbol | |
ID | 5733450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1814695 |
End bp | 1815468 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641278702 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001544334 |
Protein GI | 159898087 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.781509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGCAA CAGTCAAAGT GCTGATGGTC GATGATCACC CATTGTTTCG GCAAGGGGTT CGTTGGGCGC TTTCGAGCGA ACGCGATATC AAGATCATTG GAGAAGGTTC TAGTGCCGAA GAAGGCTTAG TCTTAATTTC TGAGCATGAG CCAGATGTAG TCCTCACCGA TTTGAATTTA CCCAACATGG ATGGCTTGGA GTTTACTCGC ACAATTCGCC GCCAATATCC CAACATCGGC GTGGTGATGT TGAGCGTTTA CGAAAGCGAT GAGCATGCCT TCAACGCCTT ACGCGCTGGA GCCGCCGCCT ATTATTCCAA GGAAATTAGC CCCAAAACCT TGGCAACTGT CTTGCGGCGC GTCGCTCGTG GCGAATATGT GATCAACGAT GTAATGTTTG AAGATCCACG GGTCGCTGAT CGGATTTTGA CCCAGTTTCG TGGTTTGCAA ACTGGCATCG TAGCCGAGCC AGACCTCGAT ATTAGTTTGT TCTCGCCGTT GAGCGACCGT GAAATTGAGG TGCTAGAGCA TATTGCCAGC GGTGCAACCA ACAAAGATAT CGCCGATGCG CTCAAAATTA GCACCCAAAC CGTCAAAAAC CATATTTCAT CGATTTTGCG CAAGCTTTCG CTGAATGATC GAACCCAAGC GGTGCTATAC GCCCTGCGTC GTGGCTGGAT CGAAACGCCA GCAACCTTGC TTGAAAGTAT CGAACGTCGC GGAGCACAGG CAGCACTGAA TTTTAATAAT GATGATGATA ACGACGACGA ATGA
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Protein sequence | MYATVKVLMV DDHPLFRQGV RWALSSERDI KIIGEGSSAE EGLVLISEHE PDVVLTDLNL PNMDGLEFTR TIRRQYPNIG VVMLSVYESD EHAFNALRAG AAAYYSKEIS PKTLATVLRR VARGEYVIND VMFEDPRVAD RILTQFRGLQ TGIVAEPDLD ISLFSPLSDR EIEVLEHIAS GATNKDIADA LKISTQTVKN HISSILRKLS LNDRTQAVLY ALRRGWIETP ATLLESIERR GAQAALNFNN DDDNDDE
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