Gene Noca_1438 details

Gene Information

• Locus tag: Noca_1438
• ID: 4597206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 1524224
• End bp: 1524865
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639776036
• Product: response regulator receiver
• Protein accession: YP_922639
• Protein GI: 119715674
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.494689
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTCGTGG TCGATGACCA GGAGCTGTTC CGTCGAGGCC TGACGATGCT GCTCGGAACC 
GAGGCCGGTA TCGAGGTGGT CGGCGAAGCC GGCGACGGCG TCGAGGGCAC CAACCTCGCG 
GCGACTGCCG CACCCGACGT CGTGCTCCTC GACATCCGGA TGCCGAAGCG CTCCGGGATC 
GAGGCGTGCC TCGCGATCAA GGAGGCCGTC CCGTCGGCGA AGATCATCAT GCTGACGGTC 
TCCGACGAGG AGGCTGACCT CTACGAGGCG GTCAAGAGCG GCGCCTCCGG CTACCTGCTC 
AAGGACTCCT CGATCGAGGA GGTCGCGCAG GCGGTCCGCG TCGTCGCGGA CGGCCAGTCG 
CTGATCAGCC CGTCGATGGC GGTCAAGCTG ATCGACGAGT TCAAGCAGAT GTCGCGCCCC 
GAGCGCGACC ACGTCCCCGG CCTACGGCTC ACCGAGCGAG AGCTCGAGGT GCTGCGCCTG 
GTGGCGAAGG GCATGAACAA CCGGGAGATC GCCAAGGAGC TGTTCATCAG CGAGAACACG 
GTCAAGAACC ACGTGCGCAA CATCTTGGAG AAGCTCCAGC TGCACTCGCG CATGGAGGCC 
GTGATGTACG CCGTCAAGGA GAAGCTGCTC GAGCTGCCGT GA 

 

Protein sequence

MLVVDDQELF RRGLTMLLGT EAGIEVVGEA GDGVEGTNLA ATAAPDVVLL DIRMPKRSGI 
EACLAIKEAV PSAKIIMLTV SDEEADLYEA VKSGASGYLL KDSSIEEVAQ AVRVVADGQS 
LISPSMAVKL IDEFKQMSRP ERDHVPGLRL TERELEVLRL VAKGMNNREI AKELFISENT 
VKNHVRNILE KLQLHSRMEA VMYAVKEKLL ELP