| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1550 |
|---|
| Symbol | |
|---|
| ID | 4116880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1569923 |
|---|
| End bp | 1570585 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638036346 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_644324 |
|---|
| Protein GI | 108804387 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCC CGGTGCGGGT GATGATCGTC GAGGACCAGG CGCTCATGCG CGAGGGGCTG
AGGACGCTCC TGGACCTGGA GGAGGGGGTC GAGGTGGTGG GGGAGGCGGC CGACGGGGTG
GAGGCGCTGG AGCGCCTCCC CGGGGCGAGG CCGGAGGTCG TGCTCGTGGA CGTGAGGATG
CCCCGGATGG ACGGGATCCA GCTCATAGAG CGCCTCGGCC GCGAGCACCC GGAGGTCGCG
GCGATCATCC TGACCACCTT CGACGACGAC GAGTACGTCT TCCGGGGGCT GAGGGCCGGG
GCCAGGGGCT ACATCCTCAA GGACACGCCC TCGGAGGAGC TCGCCGCCGC GATAGAGAAG
GTGCACCGCG GCGAGGCCGT GCTGGACGGC CCGATCACGC TGAAGGTGAT CTCGGAGCTG
GGGCGCCTCT CGAAGGGGCC GGCGGGCCCG CAGCCCGGCT CCGGGGGGCT CTCCGAGCGG
GAGATGGAGG TGCTCCGGCT CGTGGCCTCG GGGGCCTCGA ACCGGGAGAT CGCCCGCGCC
CTCTACATCA CCGAGGGCAC GGTGAAGAAC CACATCTCGA GCATCCTGAG GAAGCTCGGC
TTCAGGGACC GCACCCAGGC CGCCCTCTAC GCGCTCGAGC GCGGCTGGAT AGAGGCGCCG
TGA
|
|---|
| Protein sequence | MSGPVRVMIV EDQALMREGL RTLLDLEEGV EVVGEAADGV EALERLPGAR PEVVLVDVRM
PRMDGIQLIE RLGREHPEVA AIILTTFDDD EYVFRGLRAG ARGYILKDTP SEELAAAIEK
VHRGEAVLDG PITLKVISEL GRLSKGPAGP QPGSGGLSER EMEVLRLVAS GASNREIARA
LYITEGTVKN HISSILRKLG FRDRTQAALY ALERGWIEAP
|
|---|
| |