| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5840 |
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| Symbol | |
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| ID | 5674163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7085087 |
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| End bp | 7085800 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641244690 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001510092 |
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| Protein GI | 158317584 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0206065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.380036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGG ACGAGCAGCG TTCCGAGGAG GCGCTGCGTA CGCCATCGGA GGCGAATCCC
ATCCGGGTGC TCATCGTTGA CGACCATGCC CTGTTCCGGC GCGGCCTGGA GATGGTCCTG
GCGCAGGAGG TCGACATCGA GGTCGTCGGT GAGGCCGCCG ACGGGGCGGA GGCGGTCACG
ATGGCCGCCG AGATGGCGCC GGACATCGTC CTGATGGATG TCCGCATGCC CAGGCGCGGT
GGGATCGACG CCACGAGCGC CATCAAGGAG AAGGTGCCCA GCGCGAAGAT CGTGATGCTC
ACGATAAGTG ACGAGGAAGC CGACCTCTTT GACGCCATCA AGGCCGGCGC CATGGGCTAC
CTCCTCAAGG AGATCTCGAT CGACGAGGTC GCCGCGGACA TTCGGGCGGT CTACAACGGC
CAGAGCCTCA TCAGCCCGTC CATGGCCTCC AAGCTGCTCA GCGAGTTCGC GGCCATGATC
AAGACGAAGG ACGACCGCCC GCAGCTCCCG ACACCGCGGC TGACCGACCG GGAGATGGAG
GTCCTCCGCC TGGTCGCCAA GGGGCTGAAC AACCGGGACA TCGCCAAGCA GCTCTACATC
AGCGAGAACA CGGTGAAGAA CCACATCCGG AACATCCTGG AGAAGCTCCA GCTCCACTCC
CGGATGGAGG CGGTGGTGTA CGCGGTGCGG GAGAAGTTGC TCGAGATCAC CTGA
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| Protein sequence | MTVDEQRSEE ALRTPSEANP IRVLIVDDHA LFRRGLEMVL AQEVDIEVVG EAADGAEAVT
MAAEMAPDIV LMDVRMPRRG GIDATSAIKE KVPSAKIVML TISDEEADLF DAIKAGAMGY
LLKEISIDEV AADIRAVYNG QSLISPSMAS KLLSEFAAMI KTKDDRPQLP TPRLTDREME
VLRLVAKGLN NRDIAKQLYI SENTVKNHIR NILEKLQLHS RMEAVVYAVR EKLLEIT
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