Gene Cagg_3359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3359 
Symbol 
ID7267099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4072295 
End bp4072954 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content60% 
IMG OID643568168 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002464639 
Protein GI219850206 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00321115 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000132937 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTAATC CGATCACGAT TCTGATTGCT GATGACCATA CCATGTTCCG GCAAGGCCTA 
CGCGAGATCC TAGAGCGCAA AGGTGGGTTC CAGGTTGTCG CCGAAGTGCG TGATGGTGCA
GCAGCAGTCG AAGCGGCGAA AACGACAAAA CCCGATGTTG CGCTCCTCGA TGTTTCAATG
CCGGTCATGA CCGGCATTGA GGCGGCGCGC CAGATCGGGC AGGTCAGTCC CCACACCCGC
TGCGTCGTGC TGACGATGCA CCGCGACGAG CAGACCGTGC TCGAAGCGTT ACGGGCAGGT
GCCAATGCTT ATCTGCTGAA AGATGCAGAT GCGTCAGAGC TGATCGAGGC GATTCACGTT
GTGTACCGCG GTGAGGCGGC GTTGGCCGGC AGTGCTGCGG CGCGCGTGCT CGATCTGCTG
CGACGCAACG ATAACGCACC GGCGCTGCAT GAGGTGCTGA CCCCACGTGA ACGGGATATT
CTGGCGCTCG TTGCCCAAGG TGACGATAAC CGCGCGATTG CGCTGAAGCT AAGCCTTGCC
GAAAAGACGG TCGGTAACCG CTTGAGCGAG ATTTTTCAGA AGCTTGGGGT GAGTAATCGG
ACTCAGGCGG CGATTGTGGC GGTGCAACGG GGGCTGGTAC CGCCGCCAGA GTTGCGGTAA
 
Protein sequence
MSNPITILIA DDHTMFRQGL REILERKGGF QVVAEVRDGA AAVEAAKTTK PDVALLDVSM 
PVMTGIEAAR QIGQVSPHTR CVVLTMHRDE QTVLEALRAG ANAYLLKDAD ASELIEAIHV
VYRGEAALAG SAAARVLDLL RRNDNAPALH EVLTPRERDI LALVAQGDDN RAIALKLSLA
EKTVGNRLSE IFQKLGVSNR TQAAIVAVQR GLVPPPELR