| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5512 |
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| Symbol | |
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| ID | 5675764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6678526 |
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| End bp | 6679278 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641244367 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001509772 |
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| Protein GI | 158317264 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.631776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAA AACCGAACCC GATTTCCGGA TGTGTGATGA CGGCCAGTGT GGTGCCGCCG
TCGGCCGCTG ATGCCGACCC GACCCGTGAC GTGATGCCGA TACGGGTTCT CGTCGTGGAC
GATCACGAGC TCTTCCTCCA GGGCCTGCAG ACCGTACTGG AGACCGAGGA GGACATTTCG
GTGGTCGGGC GCGCGGCGGA CGGGCAGGAG GCGCTGACCC TGGCGTCCGG CACGACGCCG
GACATCGTCC TGATGGACGT GCGGATGCCG GGCCGCGACG GCATCGCCGC CGCCGGCGCC
ATCAAGCGCG CGGTGCCGCG CACGCGGATC GTGATGCTCA CGGTTTCGGA CGAGGAGTCC
GATCTGTTCG AGGCGATCAA GGCGGGGGCC GTCGGCTACC TGCTGAAGTC GATCCCGCCG
CACGAGGTGG CCGACGCGGT GCGCGCCGTG CACAACGGCC AGAGCCTGAT CAGCCCCTCG
ATGGCCTCGA AGCTCATGGT CGAGTTCGCG ACGATGGCCC GTGGTGGGGA GGACCGCCCG
CGCGCGCACG CGCCCCACCT CACCGCCCGC GAGCTCGAGG TCCTCAAGCT GGTGGCCGAG
GGCCGGGCGA ACCGCGAGAT CGCGCGGAAG CTCTTCATCA GTGAGAACAC CGTGAAGAAC
CACGTTCGCA ATATTCTTGA CAAGCTTCAG CTGCACTCCC GCATGGAGGC GGTGATGTAC
GCCGTCCGCC AGGGCCTGTT CGACATCGAA TAA
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| Protein sequence | MAQKPNPISG CVMTASVVPP SAADADPTRD VMPIRVLVVD DHELFLQGLQ TVLETEEDIS
VVGRAADGQE ALTLASGTTP DIVLMDVRMP GRDGIAAAGA IKRAVPRTRI VMLTVSDEES
DLFEAIKAGA VGYLLKSIPP HEVADAVRAV HNGQSLISPS MASKLMVEFA TMARGGEDRP
RAHAPHLTAR ELEVLKLVAE GRANREIARK LFISENTVKN HVRNILDKLQ LHSRMEAVMY
AVRQGLFDIE
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