| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0632 |
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| Symbol | |
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| ID | 5131852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 619521 |
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| End bp | 620195 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640529535 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001214095 |
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| Protein GI | 147669277 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00385785 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACTA CCCAGATGAT AAAAGTGCTT TTGGCAGATG ACCACGTAAT CGTACGGGAA
GGCACGCGGG AGCTTATACA GCGCGAATCC GGCATGATGG TGGTGGGCGA AGCCTCAGAC
GGAGTTGAAG CCGTAGAAAT GTCCATGAAG GTTCACCCTG ATGTGGTAGT TATGGATATT
GCCATGCCCC GCCTAAATGG AATTGAGGCC ACCAAACAGA TAAAACAGCT CCTGCCTACC
ACTGCCATAC TTATACTTAC AGCTTACGAA TCTGAGCAGT ATATTCTGGC CATACTGGAA
GCAGGTGCCG CCGGTTTTCT GCTGAAAAAC GTGAAGGGCA CCCAGTTGCT TGAAGCTATC
CGCTCTGTAT ATGCCGGCGA ATCGGTACTC CAGCCCTCTA CTACCCGCCG GGTTATTGAC
CAGCTGATTA ACAAAGCCGC CAAAACAGAG GAACTATCTG CTGTAAACCC GCTTACCGAA
CGTGAAATAG AAGTATTGAA AATGGCGGCA CGGGGCGTCA GCAATAAAGA TATTGCCGAC
CAGCTGTATT TATCCAACCG CACTATCCAG ACCCATCTTT CAAATATTTT CAAAAAGTTA
TCGGTAGGTT CGCGGACTGA AGCTATTCTC TACGGGCTGA AACGCGGCTG GTTTATCATG
GAAGATTTGC CCTGA
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| Protein sequence | MQTTQMIKVL LADDHVIVRE GTRELIQRES GMMVVGEASD GVEAVEMSMK VHPDVVVMDI
AMPRLNGIEA TKQIKQLLPT TAILILTAYE SEQYILAILE AGAAGFLLKN VKGTQLLEAI
RSVYAGESVL QPSTTRRVID QLINKAAKTE ELSAVNPLTE REIEVLKMAA RGVSNKDIAD
QLYLSNRTIQ THLSNIFKKL SVGSRTEAIL YGLKRGWFIM EDLP
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