Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4290 |
Symbol | |
ID | 4071863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 5098673 |
End bp | 5099329 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637986323 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_593364 |
Protein GI | 94971316 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTGTT TGCTGGTTGA CGATCACACG CTGTTCCGGC AGGGCGTACG CCGTTTGCTG GAAGGCGAAA GCGACTTTGA AGTGGTTGGC GAATCGCCGG ACGCCGGCGA CGCGGTGGAA AAAGCCCGCG AACTCCGCCC CGACGTGGTC CTGATGGACA TCGGCATGCC CGGACTTTCT TCGTTCGAAG CGGCGCGACA TATCAAGAAG AACCGTCCGG AGACAAAAAT CCTCTTTCTC ACCATGTATG AGGACGAAGA CTACCTGGTG CAGTGCCTGG AAGTTGGCGC TGCCGGATAT GTGCTGAAGG ACACGCCAGC TCCACAACTC GTGACCGCAG TTCGCGACGT GTACAAAGGC GGCAAGTACC TTAGCTCGCA AGTGCTTGGC AAGCTGGTGG AAGACTTCCG CGCGCGAGTG CGCGATGCCA AGCTGCGGCC TCGCATCTCT ACTCTTACCC CGCGCGAGCG CGAGATTCTC AAGCTGCTTG CAGAAGGCAA CTCAGTGAAG GAGATCGCGG TACTGTTGGG CCTCAGTGTG AAGACCGTGG AAGCGCACAA GTTCAACCTG ATGCGCAAAC TCGATATTCA CAACAAGGCG CAACTGGTGA CCTACGCGAT CCAAAAGAAG ATCATCAAGA TTCCAGTCAA CCAGTAG
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Protein sequence | MRCLLVDDHT LFRQGVRRLL EGESDFEVVG ESPDAGDAVE KARELRPDVV LMDIGMPGLS SFEAARHIKK NRPETKILFL TMYEDEDYLV QCLEVGAAGY VLKDTPAPQL VTAVRDVYKG GKYLSSQVLG KLVEDFRARV RDAKLRPRIS TLTPREREIL KLLAEGNSVK EIAVLLGLSV KTVEAHKFNL MRKLDIHNKA QLVTYAIQKK IIKIPVNQ
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