Gene Rxyl_0160 details

Gene Information

• Locus tag: Rxyl_0160
• ID: 4117806
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 167600
• End bp: 168238
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 638034951
• Product: two component LuxR family transcriptional regulator
• Protein accession: YP_642950
• Protein GI: 108803013
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGCGGGG AGGGGAGGGT GCGCCTCCTG ATCTGCGACG ACCACCCGGT CGTCCGCGCG 
GGGCTGCGCG GGATGCTCGC CGGGGAGCAG GACCTGGAGG TGGCGGGGGA GGCCGCAAAC 
GGCCGGGAGG CCGTGGAGCT CGCCCGCTCG CTGCGCCCCG ACCTGGTGCT GATGGACCTC 
CGGATGCCCG AGATGGACGG GGTGGCCGCC ACCGAGAGGA TCCTCGCCGA GCTCTCGCAG 
ACCCGGGTGC TCGTCCTCAC CACCTACGAC TCGGACGCGG ACATCCTGCG GGCCGTGGAG 
GCGGGGGCGA GCGGCTACCT GCTCAAGGAC GCCCCGCGGG AGGAGCTCTT CGCCGCGATT 
CGCGCCGCCA TGGCCGGGGA GTCGCCGCTG GACCCGGCCG TGGCCTCCCG GCTCATGCGC 
CGGGTGCGCA CCCCGCCCGA GAACGCCCTC AGCGGCCGCG AGATAGAGGT GCTGGACCTG 
GTCGCCCAGG GCGCGAGCAA CCGCGAGATC GCCCGGCAGC TGTGGATCAG CGAGACCACC 
GTCAAGACCC ACCTGCTGCA CATCTACGAG AAGCTGGGCG TCGCAGACCG TACCGCCGCG 
GTCACCGCCG CCATAAAGCG CGGGATCATC CGGCTCTAG 

 

Protein sequence

MSGEGRVRLL ICDDHPVVRA GLRGMLAGEQ DLEVAGEAAN GREAVELARS LRPDLVLMDL 
RMPEMDGVAA TERILAELSQ TRVLVLTTYD SDADILRAVE AGASGYLLKD APREELFAAI 
RAAMAGESPL DPAVASRLMR RVRTPPENAL SGREIEVLDL VAQGASNREI ARQLWISETT 
VKTHLLHIYE KLGVADRTAA VTAAIKRGII RL