| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4035 |
|---|
| Symbol | |
|---|
| ID | 3911842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4605621 |
|---|
| End bp | 4606307 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637885939 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_487639 |
|---|
| Protein GI | 86751143 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCAC ATCCGATGGA CCAGCAGGCC CCCTCCCGAT TGCGCGTCTT CCTCGCCGAC
GATCATCCGG TCGTGCTCAG CGGCATGAAG GCGCTCGTCG CCGGCGATCC CGCCCTCGAG
GTCGTGGGCG AGGCGAGCGA CGGACCGAAC GCGCTGCGTC GCGCGACCGA ATTGCGGCCC
GACGTCGCGG TGCTCGATCT GTCGATGCCC GGCCTGAACG GCATCGAGGT AGCCCGGAAA
TTTCTCGCCG CTTGTCCCGA ATGCCGGGTG CTGGTGCTGA CCGTGCACGA GGACGGCGCT
TATCTGCGCC AGTTGCTCGA TCTCGGCGTG TCCGGCTACG TGCTGAAGCG CTCCGCCACC
GAGGAGTTGA TCCGCGGCAT TCACGCGGTC GGCACCGGCG GCATCTATCT CGATCCGGCG
ATCGCCGGCC GCGCGATCGG CCGCAGCGCG CCGCATGTGC ACAACAGCGA GGAGCACAGC
GCGGTGTCCG AACTGTCGAC CCGCGAGATC GAGGTGCTGC GGCTCGCCGC CGTCGGCCAC
AGCAACAAGA CGATCGCCGC CAAGCTGCAG ATCGGCGCCA AGAGCGTCGA GACCTACAAG
GCCCGCGGCA TGGCCAAGCT CGGCTTCCAC AACCGCGTCG AAGTGGTGCG CTTCGCGCTC
AGCATGGGCT GGCTGGCGGA CCCGTAG
|
|---|
| Protein sequence | MEAHPMDQQA PSRLRVFLAD DHPVVLSGMK ALVAGDPALE VVGEASDGPN ALRRATELRP
DVAVLDLSMP GLNGIEVARK FLAACPECRV LVLTVHEDGA YLRQLLDLGV SGYVLKRSAT
EELIRGIHAV GTGGIYLDPA IAGRAIGRSA PHVHNSEEHS AVSELSTREI EVLRLAAVGH
SNKTIAAKLQ IGAKSVETYK ARGMAKLGFH NRVEVVRFAL SMGWLADP
|
|---|
| |