Gene Nther_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0648 
Symbol 
ID6314848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp671794 
End bp672441 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content37% 
IMG OID642643031 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_001916831 
Protein GI188585286 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTT CGGTACTAGT AGTTGATGAT CATGCCGTAC TTGGAAAAGG ATTGAGTATG 
CTTTTAAATT CCCAAGATGA TATGGAGGTA TGTGGGCAAG TTGGTACTGC CAAAGAAGCT
TTAGATACAT GCAAGGAAAA ATGTCCCGAT GTAGTATTAC TGGATCTGTC ACTCCCAGAT
AAACAGGGTC ATGAAATAAT CAAAGAACTC AAAGAATCTT GTAGTGCCCG AGTTTTGGCA
CTGACAATGC ACGAAGATGA AGCTTATTTC AAAAGAGTGG TTGAAGCAGG AGGAGATGGG
TATATTTTAA AAAAAGCAGC TGATGACGAA TTGATTTCAG CCATCAGGTC AGTTTATCAA
GGAGAAGTTA TTGTAGATAA AACTTTTACT AAATTATTAA TCGACTATTA TCGAAACCCA
GATAAACAGA GCGGTACAGA AAAAAACTAT GATCTCAGCG ACAGGGAAAA GGAAGTATTG
CAGCTAATAG CCTTAGGATA TACCAATAAA GAAATTGCCG AGAAATTATA TATAAGCATA
AAAACGGTGG AAACCCATAT TGCAAGAATA AAAGAAAAAT TAGGCCTTAA CCGCAGATCC
GAGCTAGTCC GATATGCAAT GAGAAATAAT ATAATCAGTA CCGAGTGA
 
Protein sequence
MTISVLVVDD HAVLGKGLSM LLNSQDDMEV CGQVGTAKEA LDTCKEKCPD VVLLDLSLPD 
KQGHEIIKEL KESCSARVLA LTMHEDEAYF KRVVEAGGDG YILKKAADDE LISAIRSVYQ
GEVIVDKTFT KLLIDYYRNP DKQSGTEKNY DLSDREKEVL QLIALGYTNK EIAEKLYISI
KTVETHIARI KEKLGLNRRS ELVRYAMRNN IISTE