Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5322 |
Symbol | |
ID | 5750934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5902776 |
End bp | 5903438 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641300447 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001566336 |
Protein GI | 160900754 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.929677 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCCA TGATCCGCAT CCTCCTGGTG GACGACCACC CTCTCGTGCG CGACGGCGTG TCCATGCGCC TGCAGGCCAC GGACCATATC CGTGTGGTGG GCGAGGCCGC CAGCGTGGAC CAGGCCCTGC CGCTGGCCCG CCAGCTGTCG CCCGACCTGG TGGTCACCGA CATCCGCATG CCGGGCGCCA GCGGCATCGA CCTGGCCGCG CTGTTCCGCG ATCAGTTCCC CCTGGTGCGC GTGCTGGTGC TGTCCATGCA TGAGGATCCC GAATACGTGC GCCGCGCCGT GGCGCTGGGC GCGCGCGGCT ATGTGCTCAA GGACGCGCCT GCGCAGCAGC TCATCGAGGC CATAGACCGG GTCTACGCCG GCGGCCTGTA TTTCAGCCCC GGCCTGCAGC CCGTGGCCGA AGAAGACGGC AGCGCGTCCG GGCCCCGGCG CGCCCTCACG CCGCGCGAGG CCAGCGTGCT GCAGTGGATC TCGGAGGGCC GCTCCAACAA GGAAATCGCC GCGCTCATGG GCACCTCGGT GCGCACCGTG GAAACCCACC GCCTGCACCT GCGCCGCAAG CTGCGCATCG ACGGCCATGC GGCCTTCATC AAGTACGCGG TGGATTACGC CGACCTGCTG GGGCCGGCAC CCCAGGAGGC CCGCGCAGGC TAG
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Protein sequence | MNPMIRILLV DDHPLVRDGV SMRLQATDHI RVVGEAASVD QALPLARQLS PDLVVTDIRM PGASGIDLAA LFRDQFPLVR VLVLSMHEDP EYVRRAVALG ARGYVLKDAP AQQLIEAIDR VYAGGLYFSP GLQPVAEEDG SASGPRRALT PREASVLQWI SEGRSNKEIA ALMGTSVRTV ETHRLHLRRK LRIDGHAAFI KYAVDYADLL GPAPQEARAG
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