| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1026 |
|---|
| Symbol | |
|---|
| ID | 4785629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1096841 |
|---|
| End bp | 1097494 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640089589 |
|---|
| Product | response regulator protein |
|---|
| Protein accession | YP_001020223 |
|---|
| Protein GI | 124266219 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACG AACCCGACGC GCCCCGCGTC CGACTGCTGA TCGTCGACGA CCACCCGCTC
GTGCGCGAGG GCCTGCGCTC GCGCCTGCAG GCGATCGCCT GGCTCGAGGT GGTGGGCGAG
GCCGGCAGCG CACGAGAGGC GCTGGAGCTG ATCCCGCAGC TGCACCCCGG CCTGGTGCTG
ATGGACGTCG GCATGCGCGA GATCAACGGC ATCGAGCTCA CCCGCCTGCT GGCGCAGCGC
CATCCGGCGG TGGCCGTGCT GGTGCTCAGC ATGTACGACA ACCCCGAGTA CGTGCAGCAG
GCCATGCAGG CCGGCGCCCG CGGCTACGTG CTGAAGGACG CGCCCTCGGC CGACATCATC
GCGGCCATCG AGGCGGTGTG CGCCGGCGGC ACCTTCCTGA GTCCGTCAGT GTCCAAGCGC
CTGTTCCGCG GCCAGGCGCC GAAGCCGCTG GTCTCGCACC GGGAGAGCGA GATCCTCGCC
TGCCTGGCCG ACGGCCTGTC GAGCAAGCAG ATCGCCGAGC GGCTGGACCT GAGCGTGCGC
ACCGTCGAGA CGCATCGCCA GAACATCAAG CGCAAGCTGG GCATCGAGGG TCAGGCGGAG
CTGATCAAGT ACGCGGTCGA GCACGGCCGG CGCTACCGCG AAGACGAGGG CTGA
|
|---|
| Protein sequence | MSHEPDAPRV RLLIVDDHPL VREGLRSRLQ AIAWLEVVGE AGSAREALEL IPQLHPGLVL
MDVGMREING IELTRLLAQR HPAVAVLVLS MYDNPEYVQQ AMQAGARGYV LKDAPSADII
AAIEAVCAGG TFLSPSVSKR LFRGQAPKPL VSHRESEILA CLADGLSSKQ IAERLDLSVR
TVETHRQNIK RKLGIEGQAE LIKYAVEHGR RYREDEG
|
|---|
| |