| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0901 |
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| Symbol | |
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| ID | 6162216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 965441 |
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| End bp | 966148 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663651 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001789938 |
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| Protein GI | 171057589 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC AGGCCAGCCC GAACCCGCTG CACGATCTGC ACATCCTGAT CGTCGACGAC
CACGTGATCG TGCGCGAAGG GCTGCAGCGC ATCCTCGAAG CCACCGGCGC GGGCTGGGTG
GTGGCCGAGG CCAGCAGCGG CTTCCAGGCG CTCGAGGTGA TGCGCCACCA GCCGATCGAT
CTGGCGATCG TCGACCTGTC GATGCCGGGC ATGAACGGGC TGGACCTGAT CAAGCGCATC
CGCACCGAAT TCCCGCGGGT GCGCGTGCTG GTGCTGAGCA TGCATGCCGA GGAGCAGTAC
GCCATGCGGG CGTTCAAGGC CGGTGCCAAC GGCTACGTGA CCAAGGACGG CGCATCGGCC
GAGCTGGTCA ACGCCGTGCG CAAGGTCGCC ACCGGCGGCG CCTACGTCAC CGCCAGCCTG
GCCGAGCGGG TGGTGCTGCA GCTCAACGGC GCGACCACCG CGCCGGGTCA CGCACAGCTG
TCGGACCGCG AGCTCGAGGT GCTGCGCCGC ATCGTCGCCG GCGAGCGGAT CACCGACATC
GCCGAGGCGC TGCACCTGTC GGTCAAGACC GTCAGCACGC ACAAGAGCCG CATCCAGGAG
AAGCTGCAGC TGCCCACCAT GGCCGCGCTG ATCCGCTACG GCATGGCGCA CGGCCTGGCT
CAGCGCGACG ACGAGCCGGG GCTCGATCTG GCCGAGCATC GGCCCTGA
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| Protein sequence | MTTQASPNPL HDLHILIVDD HVIVREGLQR ILEATGAGWV VAEASSGFQA LEVMRHQPID
LAIVDLSMPG MNGLDLIKRI RTEFPRVRVL VLSMHAEEQY AMRAFKAGAN GYVTKDGASA
ELVNAVRKVA TGGAYVTASL AERVVLQLNG ATTAPGHAQL SDRELEVLRR IVAGERITDI
AEALHLSVKT VSTHKSRIQE KLQLPTMAAL IRYGMAHGLA QRDDEPGLDL AEHRP
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