| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3186 |
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| Symbol | |
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| ID | 6207815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4144729 |
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| End bp | 4145376 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641692852 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001820066 |
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| Protein GI | 182415000 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0678517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGCC TCGTCATCGT CGAAGATCAA ACCGCCATCC GAGAAATGCT CGTGGAAATC
CTGCGGCTGG ATGCGAATTA CCAGCTCGTG GGCGAAAGCG GCGACGGCCA GAGCGCCCTC
GCACTCTGCC TGGAGGTGAA ACCGGACCTG CTGGTGCTCG ATGCCAAGCT GCCCGGCCTC
AACGGCGTCG ACCTGCTTCG CCGGATCAGC AAGAAGCTGT CGGGCATGCG CGTGCTCGTG
TTTTCCGGAC ATGAGAATCC GGTCCTGATC CGCGAAATGC TCGAGGCCGG CGCGCATGGC
TTCGTCGAAA AGACCGCGGG GCTGTTCGAA TTCAAGAAAG GACTCGAGAC CGTCGCGAGT
GGCGGCACCT ACTTCGGCCC CGCCGTGGCG GCGCTGTTGC GCAACGTCGT CGCCAATCCG
TCGGCCAGCA ACACCGCGGA TTTCCTGACC GATCGCGAGC GCGAGATTCT CCAGCTGGTG
GCAGAGAGCC ACAGCACCAA GGAGATCGCC GCGAAGCTCG GTATTAGCAT CAAAACCGTC
GACAACCATC GCACTAATTT GATGCGCAAG CTCAACCTTC ACGACGTCGC CAGCCTCACC
CGCTACGCCT TGGAGGTCGG TCTGATCGAG CCCAAGAAAT CGCTGTAA
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| Protein sequence | MKRLVIVEDQ TAIREMLVEI LRLDANYQLV GESGDGQSAL ALCLEVKPDL LVLDAKLPGL
NGVDLLRRIS KKLSGMRVLV FSGHENPVLI REMLEAGAHG FVEKTAGLFE FKKGLETVAS
GGTYFGPAVA ALLRNVVANP SASNTADFLT DREREILQLV AESHSTKEIA AKLGISIKTV
DNHRTNLMRK LNLHDVASLT RYALEVGLIE PKKSL
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