More than 300 homologs were found in PanDaTox collection
for query gene Bphy_1137 on replicon NC_010622
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010622  Bphy_1137  two component LuxR family transcriptional regulator  100 
 
 
214 aa  435  1e-121  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  82.79 
 
 
215 aa  371  1e-102  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal 
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  81.69 
 
 
215 aa  369  1e-101  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_008835  BMA10229_0760  LuxR family DNA-binding response regulator  81.69 
 
 
215 aa  369  1e-101  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2427  LuxR family DNA-binding response regulator  81.69 
 
 
282 aa  368  1e-101  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1570  LuxR family DNA-binding response regulator  80.75 
 
 
215 aa  367  1e-101  Burkholderia thailandensis E264  Bacteria  normal  0.17909  n/a   
 
 
-
 
NC_008543  Bcen2424_4365  two component LuxR family transcriptional regulator  80.28 
 
 
215 aa  368  1e-101  Burkholderia cenocepacia HI2424  Bacteria  normal  0.902614  normal 
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  81.69 
 
 
215 aa  369  1e-101  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1154  LuxR family DNA-binding response regulator  81.69 
 
 
215 aa  369  1e-101  Burkholderia pseudomallei 1106a  Bacteria  normal  0.324728  n/a   
 
 
-
 
NC_010515  Bcenmc03_5989  two component LuxR family transcriptional regulator  80.28 
 
 
215 aa  368  1e-101  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  80.75 
 
 
215 aa  367  1e-101  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal 
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  80.75 
 
 
215 aa  367  1e-101  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.329832 
 
 
-
 
NC_009075  BURPS668_A1228  LuxR family DNA-binding response regulator  81.22 
 
 
215 aa  368  1e-101  Burkholderia pseudomallei 668  Bacteria  normal  0.0904383  n/a   
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  80.57 
 
 
215 aa  365  1e-100  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal 
 
 
-
 
NC_007511  Bcep18194_B1652  two component LuxR family transcriptional regulator  80.28 
 
 
215 aa  367  1e-100  Burkholderia sp. 383  Bacteria  normal  0.187578  normal  0.308689 
 
 
-
 
NC_008061  Bcen_4002  two component LuxR family transcriptional regulator  79.81 
 
 
215 aa  365  1e-100  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_5813  two component LuxR family transcriptional regulator  82.08 
 
 
215 aa  361  4e-99  Burkholderia phymatum STM815  Bacteria  normal  normal  0.118405 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  77.46 
 
 
216 aa  349  1e-95  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  78.4 
 
 
216 aa  350  1e-95  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5903  two component LuxR family transcriptional regulator  76.74 
 
 
215 aa  346  1e-94  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.68975  normal  0.398777 
 
 
-
 
NC_010557  BamMC406_6196  two component LuxR family transcriptional regulator  75.81 
 
 
215 aa  346  1e-94  Burkholderia ambifaria MC40-6  Bacteria  normal  0.280791  normal  0.522243 
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  78.14 
 
 
215 aa  345  2e-94  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  78.14 
 
 
215 aa  346  2e-94  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  78.14 
 
 
215 aa  345  2e-94  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  78.14 
 
 
215 aa  345  2e-94  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_7047  two component LuxR family transcriptional regulator  77.57 
 
 
215 aa  344  4e-94  Burkholderia phymatum STM815  Bacteria  normal  normal  0.976007 
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  66.83 
 
 
215 aa  287  7e-77  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal 
 
 
-
 
NC_008543  Bcen2424_3595  two component LuxR family transcriptional regulator  65.89 
 
 
215 aa  286  2e-76  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  65.89 
 
 
215 aa  285  2.9999999999999996e-76  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  65.87 
 
 
214 aa  283  2.0000000000000002e-75  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  61.97 
 
 
215 aa  280  1e-74  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3499  two component LuxR family transcriptional regulator  66.84 
 
 
203 aa  268  5e-71  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.00551314 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  61.5 
 
 
214 aa  267  1e-70  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_010678  Rpic_4426  two component transcriptional regulator, LuxR family  59.62 
 
 
215 aa  257  9e-68  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4559  two component transcriptional regulator, LuxR family  59.62 
 
 
215 aa  257  9e-68  Ralstonia pickettii 12D  Bacteria  normal  0.0669727  normal  0.0839611 
 
 
-
 
NC_003295  RSc0192  response regulator transcription regulator protein  58.69 
 
 
215 aa  254  7e-67  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.028731 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  50.94 
 
 
235 aa  224  7e-58  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  54.11 
 
 
216 aa  224  9e-58  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  50.95 
 
 
214 aa  220  9.999999999999999e-57  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  54.46 
 
 
214 aa  216  2.9999999999999998e-55  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal 
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  51.4 
 
 
218 aa  211  4.9999999999999996e-54  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.972408 
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  52.58 
 
 
213 aa  209  3e-53  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1146  response regulator receiver  64.47 
 
 
209 aa  199  1.9999999999999998e-50  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0615  LuxR family DNA-binding response regulator  50 
 
 
212 aa  199  3.9999999999999996e-50  Burkholderia mallei ATCC 23344  Bacteria  normal  0.26011  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2347  GerE family regulatory protein  50 
 
 
212 aa  198  3.9999999999999996e-50  Burkholderia pseudomallei 1710b  Bacteria  normal  0.925531  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1047  LuxR family DNA-binding response regulator  50 
 
 
212 aa  198  3.9999999999999996e-50  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1132  LuxR family DNA-binding response regulator  50 
 
 
212 aa  198  5e-50  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  44.02 
 
 
210 aa  197  9e-50  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  44.02 
 
 
210 aa  197  9e-50  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_0853  LuxR family DNA-binding response regulator  49.52 
 
 
212 aa  197  1.0000000000000001e-49  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1818  LuxR family DNA-binding response regulator  49.52 
 
 
212 aa  197  1.0000000000000001e-49  Burkholderia mallei NCTC 10247  Bacteria  normal  0.204731  n/a   
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  47.14 
 
 
210 aa  193  1e-48  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  47.62 
 
 
210 aa  192  4e-48  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  46.19 
 
 
210 aa  191  7e-48  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2656  two component transcriptional regulator, LuxR family  46.67 
 
 
210 aa  190  1e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756738  normal  0.520546 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  46.67 
 
 
210 aa  189  2.9999999999999997e-47  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4108  two component transcriptional regulator, LuxR family  45.24 
 
 
210 aa  188  5.999999999999999e-47  Variovorax paradoxus S110  Bacteria  normal  0.755468  n/a   
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  46.67 
 
 
210 aa  187  7e-47  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1508  two component LuxR family transcriptional regulator  45.33 
 
 
236 aa  187  1e-46  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  46.67 
 
 
210 aa  187  1e-46  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  44.98 
 
 
210 aa  186  2e-46  Burkholderia phymatum STM815  Bacteria  normal  normal  0.458284 
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  45.45 
 
 
210 aa  186  2e-46  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal 
 
 
-
 
NC_008825  Mpe_A0581  two component LuxR family transcriptional regulator  45.19 
 
 
210 aa  185  4e-46  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  44.98 
 
 
210 aa  185  4e-46  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.612124 
 
 
-
 
NC_008781  Pnap_0922  two component LuxR family transcriptional regulator  44.29 
 
 
210 aa  185  5e-46  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.114328  normal 
 
 
-
 
NC_007650  BTH_II1634  LuxR family DNA-binding response regulator  49.52 
 
 
214 aa  184  8e-46  Burkholderia thailandensis E264  Bacteria  normal  0.414245  n/a   
 
 
-
 
NC_007948  Bpro_0881  two component LuxR family transcriptional regulator  44.29 
 
 
210 aa  184  1.0000000000000001e-45  Polaromonas sp. JS666  Bacteria  normal  0.464883  normal  0.594453 
 
 
-
 
NC_007614  Nmul_A1235  two component LuxR family transcriptional regulator  45.02 
 
 
211 aa  182  2.0000000000000003e-45  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  42.51 
 
 
210 aa  182  3e-45  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0301144 
 
 
-
 
NC_008752  Aave_4382  two component LuxR family transcriptional regulator  42.58 
 
 
209 aa  181  8.000000000000001e-45  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_07840  putative two-component response regulator  44.08 
 
 
210 aa  181  8.000000000000001e-45  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0171986 
 
 
-
 
NC_009656  PSPA7_0745  putative two-component response regulator  44.55 
 
 
210 aa  181  9.000000000000001e-45  Pseudomonas aeruginosa PA7  Bacteria  normal  0.536324  n/a   
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  42.86 
 
 
210 aa  180  1e-44  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  43.33 
 
 
210 aa  179  2.9999999999999997e-44  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_007614  Nmul_A1336  two component LuxR family transcriptional regulator  43.96 
 
 
208 aa  179  2.9999999999999997e-44  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  43.33 
 
 
239 aa  179  2.9999999999999997e-44  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal 
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  43.06 
 
 
211 aa  179  2.9999999999999997e-44  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_1595  two component LuxR family transcriptional regulator  43.54 
 
 
209 aa  178  4.999999999999999e-44  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00167261 
 
 
-
 
NC_007404  Tbd_1588  two component LuxR family transcriptional regulator  41.35 
 
 
215 aa  177  8e-44  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.731747  normal  0.987016 
 
 
-
 
NC_010551  BamMC406_2966  two component LuxR family transcriptional regulator  41.63 
 
 
218 aa  177  1e-43  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.288922 
 
 
-
 
NC_008390  Bamb_3100  two component LuxR family transcriptional regulator  41.63 
 
 
218 aa  177  1e-43  Burkholderia ambifaria AMMD  Bacteria  normal  0.650822  n/a   
 
 
-
 
NC_008782  Ajs_3794  two component LuxR family transcriptional regulator  41.15 
 
 
209 aa  175  5e-43  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3068  two component transcriptional regulator, LuxR family  41.15 
 
 
209 aa  175  5e-43  Acidovorax ebreus TPSY  Bacteria  normal  0.44153  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2955  LuxR family DNA-binding response regulator  40.67 
 
 
218 aa  174  6e-43  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0425  LuxR family DNA-binding response regulator  40.67 
 
 
218 aa  174  6e-43  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0536791  n/a   
 
 
-
 
NC_009080  BMA10247_3391  LuxR family DNA-binding response regulator  40.67 
 
 
218 aa  174  6e-43  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0231  LuxR family DNA-binding response regulator  40.67 
 
 
218 aa  174  6e-43  Burkholderia pseudomallei 668  Bacteria  normal  0.214964  n/a   
 
 
-
 
NC_009076  BURPS1106A_0243  LuxR family DNA-binding response regulator  40.67 
 
 
218 aa  174  6e-43  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2133  LuxR family DNA-binding response regulator  40.67 
 
 
218 aa  174  6e-43  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0209  LuxR family DNA-binding response regulator  41.15 
 
 
218 aa  174  9e-43  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA3290  LuxR family DNA-binding response regulator  40.67 
 
 
455 aa  173  1.9999999999999998e-42  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  41.43 
 
 
210 aa  172  2.9999999999999996e-42  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  43.66 
 
 
215 aa  172  2.9999999999999996e-42  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal 
 
 
-
 
NC_008786  Veis_2180  two component LuxR family transcriptional regulator  41.15 
 
 
209 aa  171  7.999999999999999e-42  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.876214 
 
 
-
 
NC_007492  Pfl01_5126  two component LuxR family transcriptional regulator  42.45 
 
 
209 aa  171  7.999999999999999e-42  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.135043  normal  0.384971 
 
 
-
 
NC_009439  Pmen_4004  two component LuxR family transcriptional regulator  45.45 
 
 
209 aa  170  1e-41  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6403  two component LuxR family transcriptional regulator  39.71 
 
 
271 aa  170  2e-41  Burkholderia sp. 383  Bacteria  normal  normal  0.285313 
 
 
-
 
NC_010002  Daci_0651  two component LuxR family transcriptional regulator  41.63 
 
 
209 aa  169  2e-41  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.713834 
 
 
-
 
NC_008825  Mpe_A2902  two component LuxR family transcriptional regulator  43.33 
 
 
212 aa  169  2e-41  Methylibium petroleiphilum PM1  Bacteria  normal  0.255362  normal 
 
 
-
 
NC_008825  Mpe_A3494  two component LuxR family transcriptional regulator  38.67 
 
 
226 aa  169  3e-41  Methylibium petroleiphilum PM1  Bacteria  normal  0.514045  normal 
 
 
-
 
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