More than 300 homologs were found in PanDaTox collection
for query gene PSPTO_3526 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_3526  DNA-binding response regulator, LuxR family  100 
 
 		 220 aa  441  1e-123  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0134281  n/a   
 
 
-
 
NC_007005  Psyr_3299  LuxR response regulator receiver  82.73 
 
 		 220 aa  376  1e-103  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0158345  normal  1 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  74.55 
 
 		 219 aa  328  4e-89  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  74.09 
 
 		 219 aa  320  9.999999999999999e-87  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  74.55 
 
 		 219 aa  317  1e-85  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  74.55 
 
 		 219 aa  315  2e-85  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  74.66 
 
 		 219 aa  316  2e-85  Pseudomonas putida W619  Bacteria  normal  0.118638  normal  1 
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  60.91 
 
 		 214 aa  252  3e-66  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  47.22 
 
 		 219 aa  194  9e-49  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  47.91 
 
 		 226 aa  176  2e-43  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  39.63 
 
 		 220 aa  174  9.999999999999999e-43  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  43.19 
 
 		 215 aa  168  6e-41  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal  1 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  38.71 
 
 		 221 aa  165  4e-40  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  42.45 
 
 		 211 aa  165  5.9999999999999996e-40  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  45.54 
 
 		 217 aa  163  2.0000000000000002e-39  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  37.04 
 
 		 229 aa  160  2e-38  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  38.99 
 
 		 216 aa  155  6e-37  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  40.27 
 
 		 218 aa  154  1e-36  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  39.27 
 
 		 216 aa  153  2e-36  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  37.21 
 
 		 212 aa  150  1e-35  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  39.25 
 
 		 208 aa  150  1e-35  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  35.21 
 
 		 218 aa  150  1e-35  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  36.67 
 
 		 215 aa  149  2e-35  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  36.57 
 
 		 218 aa  149  3e-35  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  37.44 
 
 		 216 aa  149  3e-35  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  39.62 
 
 		 214 aa  149  4e-35  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  37.04 
 
 		 218 aa  148  5e-35  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  37.04 
 
 		 218 aa  148  5e-35  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  37.61 
 
 		 216 aa  148  5e-35  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  36.53 
 
 		 226 aa  148  7e-35  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  37.04 
 
 		 218 aa  148  8e-35  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  40.58 
 
 		 214 aa  146  2.0000000000000003e-34  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  38.03 
 
 		 215 aa  146  2.0000000000000003e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  35.12 
 
 		 215 aa  145  3e-34  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  35.19 
 
 		 223 aa  145  5e-34  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  37.67 
 
 		 221 aa  145  5e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  34.86 
 
 		 218 aa  145  6e-34  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_010571  Oter_3239  two component LuxR family transcriptional regulator  38.94 
 
 		 274 aa  144  8.000000000000001e-34  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  37.22 
 
 		 215 aa  143  2e-33  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  39.44 
 
 		 213 aa  143  2e-33  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  36.87 
 
 		 210 aa  141  7e-33  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  35.21 
 
 		 223 aa  141  7e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  33.8 
 
 		 264 aa  140  9.999999999999999e-33  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_2685  two component LuxR family transcriptional regulator  34.74 
 
 		 222 aa  139  1.9999999999999998e-32  Caulobacter sp. K31  Bacteria  normal  0.120511  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  36.45 
 
 		 213 aa  140  1.9999999999999998e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  39.25 
 
 		 215 aa  139  3e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  40.76 
 
 		 214 aa  139  3e-32  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  35.85 
 
 		 212 aa  139  3e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  36.11 
 
 		 214 aa  139  3.9999999999999997e-32  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  36.28 
 
 		 214 aa  139  4.999999999999999e-32  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_008752  Aave_4229  two component LuxR family transcriptional regulator  40.58 
 
 		 219 aa  138  6e-32  Acidovorax citrulli AAC00-1  Bacteria  normal  0.720334  normal  0.28913 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  34.4 
 
 		 217 aa  138  7e-32  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  38.79 
 
 		 215 aa  138  7e-32  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  38.79 
 
 		 215 aa  138  7.999999999999999e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  38.79 
 
 		 215 aa  138  7.999999999999999e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  38.79 
 
 		 215 aa  138  7.999999999999999e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  38.79 
 
 		 215 aa  138  7.999999999999999e-32  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  38.79 
 
 		 215 aa  138  7.999999999999999e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  38.39 
 
 		 214 aa  137  8.999999999999999e-32  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  36.11 
 
 		 210 aa  137  1e-31  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  34.42 
 
 		 253 aa  136  2e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  38.5 
 
 		 215 aa  137  2e-31  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  36.11 
 
 		 210 aa  136  2e-31  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  34.11 
 
 		 210 aa  136  2e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  38.14 
 
 		 225 aa  136  2e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  36.11 
 
 		 210 aa  135  3.0000000000000003e-31  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  36.11 
 
 		 210 aa  135  3.0000000000000003e-31  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  36.11 
 
 		 210 aa  135  3.0000000000000003e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  36.11 
 
 		 210 aa  135  3.0000000000000003e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  36.11 
 
 		 210 aa  135  3.0000000000000003e-31  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  38.1 
 
 		 214 aa  136  3.0000000000000003e-31  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  36.11 
 
 		 210 aa  135  3.0000000000000003e-31  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  36.11 
 
 		 210 aa  135  4e-31  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  34.5 
 
 		 215 aa  135  6.0000000000000005e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_012918  GM21_1971  two component transcriptional regulator, LuxR family  36.11 
 
 		 216 aa  135  7.000000000000001e-31  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  34.72 
 
 		 236 aa  134  9e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_010159  YpAngola_A3945  putative DNA-binding response regulator EsrB  34.91 
 
 		 210 aa  134  9e-31  Yersinia pestis Angola  Bacteria  normal  0.0480381  normal  1 
 
 
-
 
NC_010465  YPK_3919  two component LuxR family transcriptional regulator  34.91 
 
 		 210 aa  134  9e-31  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_3833  putative DNA-binding response regulator EsrB  34.91 
 
 		 210 aa  134  9e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  36.71 
 
 		 215 aa  134  9e-31  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  32.72 
 
 		 224 aa  134  9.999999999999999e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  36.11 
 
 		 210 aa  134  9.999999999999999e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  33.64 
 
 		 232 aa  134  9.999999999999999e-31  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  34.4 
 
 		 225 aa  134  9.999999999999999e-31  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  32.13 
 
 		 242 aa  133  1.9999999999999998e-30  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  35.48 
 
 		 224 aa  133  1.9999999999999998e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_1938  two component LuxR family transcriptional regulator  35.94 
 
 		 209 aa  133  1.9999999999999998e-30  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  35.94 
 
 		 209 aa  133  1.9999999999999998e-30  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_1547  response regulator  33.18 
 
 		 214 aa  134  1.9999999999999998e-30  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000288339  normal  1 
 
 
-
 
NC_008322  Shewmr7_1614  response regulator  33.18 
 
 		 214 aa  133  1.9999999999999998e-30  Shewanella sp. MR-7  Bacteria  unclonable  0.000000746753  normal  0.505035 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  38.03 
 
 		 213 aa  134  1.9999999999999998e-30  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  32.55 
 
 		 217 aa  133  1.9999999999999998e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_008577  Shewana3_1608  response regulator  33.18 
 
 		 214 aa  134  1.9999999999999998e-30  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000660452  normal  0.150334 
 
 
-
 
NC_009831  Ssed_2455  response regulator  32.71 
 
 		 214 aa  134  1.9999999999999998e-30  Shewanella sediminis HAW-EB3  Bacteria  normal  0.140183  normal  0.431169 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  34.43 
 
 		 215 aa  132  3e-30  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  34.3 
 
 		 238 aa  132  3e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_011663  Sbal223_1782  response regulator  32.71 
 
 		 214 aa  132  3e-30  Shewanella baltica OS223  Bacteria  normal  0.0381154  hitchhiker  0.0000000750596 
 
 
-
 
NC_009665  Shew185_2600  response regulator  32.71 
 
 		 214 aa  132  3e-30  Shewanella baltica OS185  Bacteria  hitchhiker  0.000388579  n/a   
 
 
-
 
NC_013037  Dfer_2055  two component transcriptional regulator, LuxR family  31.36 
 
 		 220 aa  132  3e-30  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  34.58 
 
 		 213 aa  132  3e-30  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
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