Gene Shewmr7_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1614 
Symbol 
ID4258712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1898765 
End bp1899409 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content48% 
IMG OID638122273 
Productresponse regulator 
Protein accessionYP_737669 
Protein GI114047119 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000746753 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.505035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATATCGA TATATTTAGT TGACGACCAT GAACTTGTAA GAACTGGGAT CCGTCGCATC 
TTAGAAGATG AGCGCGGGAT CAAAGTCGTG GGAGAAGCGC CAGATGGCGA GACCGCGGTA
CAGTGGGCGA GACAAAATGA AGCCGATGTC ATCTTAATGG ACATGAATAT GCCTGGGATG
GGCGGGCTCG AAGCCACACG TAAGATTTTA CGTTATCAGC CCCATGCCAA GATTATTGTA
TTAACTGTGC ATACTGAAGA TCCTTTCCCC AGTAAAGTGA TGCAGGCGGG CGCGTCTGGT
TATTTAACCA AAGGGGCAAC GCCACCTGAG GTATTGCAAG CGATACGTCA GGTTTCCCGT
GGGCAGCGCT ATCTATCCCC AGAAATAGCC CAGCAAATGG CATTGAGTCA ATTCAACCCT
GCCGATGATA ATCCGTTTAA AGCCTTGTCC GAGCGTGAGC TGCAAATTAT GTTGATGATC
ACCAATGGTG AAAAGGTCAA TGATATTTCG GAGCAGCTCA ACTTAAGCCC AAAAACCGTT
AACAGTTACC GTTATCGCTT GTTTGCGAAG CTTGGGATCA GTGGCGATGT GGAGCTGACC
CGTTTAGCGA TCCGCTATAA AATGTTAGAC GCTGGCCATT TCTAA
 
Protein sequence
MISIYLVDDH ELVRTGIRRI LEDERGIKVV GEAPDGETAV QWARQNEADV ILMDMNMPGM 
GGLEATRKIL RYQPHAKIIV LTVHTEDPFP SKVMQAGASG YLTKGATPPE VLQAIRQVSR
GQRYLSPEIA QQMALSQFNP ADDNPFKALS ERELQIMLMI TNGEKVNDIS EQLNLSPKTV
NSYRYRLFAK LGISGDVELT RLAIRYKMLD AGHF