More than 300 homologs were found in PanDaTox collection
for query gene Lcho_1782 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  100 
 
 		 214 aa  429  1e-119  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  62.2 
 
 		 217 aa  246  3e-64  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  62.14 
 
 		 214 aa  223  1e-57  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  56.52 
 
 		 213 aa  205  5e-52  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  54.85 
 
 		 213 aa  204  8e-52  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  53.23 
 
 		 214 aa  201  9e-51  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  56.16 
 
 		 214 aa  200  9.999999999999999e-51  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  55.61 
 
 		 214 aa  199  1.9999999999999998e-50  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  56.16 
 
 		 214 aa  200  1.9999999999999998e-50  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  52.74 
 
 		 214 aa  199  3e-50  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  55.67 
 
 		 214 aa  198  6e-50  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  55.67 
 
 		 214 aa  198  6e-50  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  55.67 
 
 		 214 aa  198  6e-50  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  54.19 
 
 		 215 aa  197  7.999999999999999e-50  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  54.19 
 
 		 215 aa  197  7.999999999999999e-50  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  54.19 
 
 		 215 aa  197  7.999999999999999e-50  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  54.19 
 
 		 215 aa  197  7.999999999999999e-50  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  54.19 
 
 		 215 aa  197  7.999999999999999e-50  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  54.19 
 
 		 215 aa  197  7.999999999999999e-50  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  54.19 
 
 		 215 aa  197  1.0000000000000001e-49  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  53.69 
 
 		 215 aa  196  2.0000000000000003e-49  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_4229  two component LuxR family transcriptional regulator  57.43 
 
 		 219 aa  196  3e-49  Acidovorax citrulli AAC00-1  Bacteria  normal  0.720334  normal  0.28913 
 
 
-
 
NC_012560  Avin_41040  Two-component response regulator, LuxR family  59.41 
 
 		 208 aa  193  2e-48  Azotobacter vinelandii DJ  Bacteria  normal  0.136918  n/a   
 
 
-
 
NC_010676  Bphyt_4476  two component transcriptional regulator, LuxR family  55.5 
 
 		 215 aa  192  4e-48  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_3576  two component LuxR family transcriptional regulator  51.47 
 
 		 228 aa  190  1e-47  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  49.77 
 
 		 231 aa  189  2e-47  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_007952  Bxe_B0788  two component LuxR family transcriptional regulator  56.25 
 
 		 218 aa  189  2.9999999999999997e-47  Burkholderia xenovorans LB400  Bacteria  normal  0.3296  normal  1 
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  55.61 
 
 		 214 aa  186  2e-46  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.10411 
 
 
-
 
NC_008781  Pnap_3523  two component LuxR family transcriptional regulator  47.57 
 
 		 224 aa  177  1e-43  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  47.14 
 
 		 220 aa  173  1.9999999999999998e-42  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  44.02 
 
 		 233 aa  166  2e-40  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  43 
 
 		 213 aa  166  2.9999999999999998e-40  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_0083  two component LuxR family transcriptional regulator  49.52 
 
 		 210 aa  166  4e-40  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  43.94 
 
 		 220 aa  164  6.9999999999999995e-40  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  42.29 
 
 		 206 aa  162  4.0000000000000004e-39  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  43.54 
 
 		 218 aa  162  4.0000000000000004e-39  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  44.12 
 
 		 216 aa  158  5e-38  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  40.65 
 
 		 218 aa  157  1e-37  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  42.11 
 
 		 232 aa  157  2e-37  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  42.21 
 
 		 213 aa  156  2e-37  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  42.21 
 
 		 213 aa  156  2e-37  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  40.67 
 
 		 217 aa  156  2e-37  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  40.29 
 
 		 224 aa  156  3e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  38.16 
 
 		 215 aa  156  3e-37  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  39.5 
 
 		 206 aa  155  5.0000000000000005e-37  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  41 
 
 		 215 aa  155  5.0000000000000005e-37  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  41.18 
 
 		 212 aa  154  8e-37  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  41.35 
 
 		 218 aa  154  9e-37  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  40.67 
 
 		 232 aa  154  1e-36  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  40.58 
 
 		 218 aa  153  2e-36  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  42 
 
 		 215 aa  153  2e-36  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  40.58 
 
 		 218 aa  153  2e-36  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3239  two component LuxR family transcriptional regulator  36.89 
 
 		 274 aa  152  2.9999999999999998e-36  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  42.23 
 
 		 219 aa  152  2.9999999999999998e-36  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_009973  Haur_5199  two component LuxR family transcriptional regulator  40.48 
 
 		 225 aa  152  2.9999999999999998e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_1121  two component LuxR family transcriptional regulator  44.39 
 
 		 222 aa  152  4e-36  Acidovorax citrulli AAC00-1  Bacteria  normal  0.864132  normal  0.872256 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  40.67 
 
 		 232 aa  152  5e-36  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  40.58 
 
 		 218 aa  152  5e-36  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  38.46 
 
 		 212 aa  150  2e-35  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_0443  two component LuxR family transcriptional regulator  42.71 
 
 		 213 aa  150  2e-35  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  37.26 
 
 		 217 aa  149  3e-35  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  37.26 
 
 		 217 aa  149  3e-35  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  36.28 
 
 		 220 aa  149  3e-35  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  40.29 
 
 		 214 aa  149  4e-35  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  40.89 
 
 		 213 aa  148  5e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  40 
 
 		 206 aa  148  7e-35  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  38.83 
 
 		 226 aa  147  8e-35  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  39.72 
 
 		 215 aa  146  2.0000000000000003e-34  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  44.44 
 
 		 217 aa  146  2.0000000000000003e-34  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  37.02 
 
 		 218 aa  146  3e-34  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  35.1 
 
 		 229 aa  145  4.0000000000000006e-34  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  41.55 
 
 		 226 aa  145  4.0000000000000006e-34  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  37.8 
 
 		 224 aa  145  5e-34  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  41.38 
 
 		 213 aa  145  6e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  38.54 
 
 		 224 aa  145  6e-34  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal  1 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  38.83 
 
 		 228 aa  145  6e-34  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  40.58 
 
 		 216 aa  145  6e-34  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  35.68 
 
 		 218 aa  144  7.0000000000000006e-34  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  40 
 
 		 219 aa  144  7.0000000000000006e-34  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  41.43 
 
 		 221 aa  144  7.0000000000000006e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  41.47 
 
 		 220 aa  144  8.000000000000001e-34  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  39.13 
 
 		 219 aa  144  8.000000000000001e-34  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  36.97 
 
 		 219 aa  144  1e-33  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  40.09 
 
 		 224 aa  144  1e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  37.32 
 
 		 224 aa  144  1e-33  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A0728  two component LuxR family transcriptional regulator  41.46 
 
 		 217 aa  143  2e-33  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  40.5 
 
 		 223 aa  143  2e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.658241 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  41.26 
 
 		 216 aa  143  2e-33  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  41.46 
 
 		 215 aa  143  2e-33  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  41.46 
 
 		 215 aa  143  2e-33  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  41.46 
 
 		 215 aa  143  2e-33  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_0043  two component LuxR family transcriptional regulator  35.38 
 
 		 234 aa  143  2e-33  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.14113 
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  39.13 
 
 		 219 aa  142  3e-33  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  39.32 
 
 		 220 aa  142  3e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  35.27 
 
 		 215 aa  142  3e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  37.86 
 
 		 222 aa  142  3e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  39.13 
 
 		 219 aa  142  3e-33  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  39.6 
 
 		 232 aa  142  4e-33  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  40.78 
 
 		 217 aa  142  5e-33  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  41.26 
 
 		 216 aa  142  5e-33  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
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