| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3615 |
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| Symbol | |
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| ID | 5191347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4038007 |
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| End bp | 4038666 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588070 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001268923 |
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| Protein GI | 148548821 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.378192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.274637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGTA GACTACTGCT GGTAGATGAC CACTCGCTGA TCCGCGCCGG GGTGCGCGCA
CTGGTCTGCG ATATCCCCGG CTATGACGTG GTCGGCGAAG CCGACGACGG CAACCAGCTA
CTCGACCAGG TACGCACACT GGCGCCCGAC ATCATCTTGC TGGACATCTC CATGCGTTCG
ACCAGCGGCC TGGACGCCCT CACCCAACTG CGGGCCAGCG GCAGTACCTG CAAAGTGCTG
ATCCTCTCCA TGCACACCGA CCCGGACCTG ATCATGCGGG CGCTGGAAAG CGGTGCCCAC
GGCTACCTGC TCAAGGACAC CAGCGCCACC GAGCTGGAAC AGGCGCTGGG TGCCGTACGC
CACGGTGAGC GCTACCTCAG CCCGGCCATC GCCCACACCG TCATCAACCA GGCGCTGCGG
CACACCAAAC AAGGCAAGCA AAGCGCTGGC GAACGGCATA ATCTGACCTC ACGGCAACTT
GAGATCCTGC GCCTGATCGT GCGCGGCAAG TCCACCCGGG AAATCGCGGC GGGTCTGGGC
CTGTCGATCA AGACCGTGGA AACTCACCGC TCGCAAATCA TGAAGCGCCT GCAGATTCAC
GACGTGGCCG GCTTGGTGCT GTTCGCCGTA CGCGAAAAAA TCATCAGCCT GGATGACTGA
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| Protein sequence | MTCRLLLVDD HSLIRAGVRA LVCDIPGYDV VGEADDGNQL LDQVRTLAPD IILLDISMRS
TSGLDALTQL RASGSTCKVL ILSMHTDPDL IMRALESGAH GYLLKDTSAT ELEQALGAVR
HGERYLSPAI AHTVINQALR HTKQGKQSAG ERHNLTSRQL EILRLIVRGK STREIAAGLG
LSIKTVETHR SQIMKRLQIH DVAGLVLFAV REKIISLDD
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