Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2600 |
Symbol | |
ID | 5372925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3101546 |
End bp | 3102190 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640830816 |
Product | response regulator |
Protein accession | YP_001366798 |
Protein GI | 153001117 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000388579 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTTCGA TATATTTGGT TGACGATCAT GAGCTTGTGA GAACTGGGAT CCGCCGCATC TTGGAAGATG AACGTGGGAT CAAAGTGGTG GGCGAAGCCC CTGATGGTGA GACTGCGGTG CAGTGGGCTC GCCAAAACGA AGCCGATGTG ATCTTAATGG ACATGAATAT GCCTGGGATG GGCGGACTGG AAGCCACTCG AAAAATTCTG CGTTATCAAC CCCATGCTAA AATTATTGTG TTGACTGTGC ACACGGAAGA TCCATTTCCG AGCAAGGTCA TGCAGGCTGG CGCTTCGGGT TATTTGACGA AAGGGGCGAC GCCGCCGGAA GTATTGCAGG CAATACGTCA GGTTTCTCGC GGTCAGCGTT ATTTATCCCC TGAAATTGCC CAACAGATGG CGCTGAGTCA GTTTAATCCC GCCGATGAAA ACCCGTTTAA GTCTTTGTCT GAACGTGAGT TACAGATCAT GTTGATGATC ACCAACGGCG AGAAGGTAAA CGATATTTCT GAGCAGCTGA ACTTGAGCCC TAAAACGGTT AACAGCTACC GTTACCGCCT ATTTGCCAAA CTGGGGATCA GTGGTGATGT CGAGCTAACG CGGTTAGCTA TTCGCTATAA AATGTTGGAT GCTGGCCATT TTTAA
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Protein sequence | MISIYLVDDH ELVRTGIRRI LEDERGIKVV GEAPDGETAV QWARQNEADV ILMDMNMPGM GGLEATRKIL RYQPHAKIIV LTVHTEDPFP SKVMQAGASG YLTKGATPPE VLQAIRQVSR GQRYLSPEIA QQMALSQFNP ADENPFKSLS ERELQIMLMI TNGEKVNDIS EQLNLSPKTV NSYRYRLFAK LGISGDVELT RLAIRYKMLD AGHF
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