| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1643 |
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| Symbol | |
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| ID | 6110589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1824796 |
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| End bp | 1825455 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641621435 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001748517 |
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| Protein GI | 170720829 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.118638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGTA GACTGCTGCT GGTCGATGAC CACTCGCTGA TTCGAGCCGG GGTACGTGCT
CTGGTGTCTG ACATACCAGG CTACACCGTG GTCGGGGAAG CCGACGATGG CGGCCAACTG
CTAGAGCAAG CCCAGCAGCT GGCGCCGGAC ATCATACTGC TCGACATTTC CATGCGCTCG
ACCAGCGGCC TTGATGCCCT CACCCTGCTG CGCGCCTCTG GCAGTACCTG CAAAGTACTG
ATCCTGTCCA TGCACACCGA CCCGGACCTG ATCATGCGCG CCCTGGAAAG CGGCGCCCAC
GGCTACCTGC TCAAAGATGC CACCGCAAAG GAGCTGGAGC AGGCACTGGC CGCGCTACGC
AGTGGCGAGC GCTACCTCAG CCCAGCCATA GCCCACACGG TGATCAACCA GGCACTCATG
CGTGCGCAGC ATGGCAAGCA GGCAAACATC GACCGCCATA ACCTAACTGC ACGGCAACTG
GAAATTCTGC GCCTGATCGT ACGGGGCAAA TCCACTCGCG AAATCGCTGC CGGGCTTGCC
CTTTCGATCA AAACGGTGGA AACCCATCGC TCGCAGATCA TGAAACGCCT GCAGATCTAC
GATGTCGCCG GCCTGGTACT GTTCGCCGTG CGCGAGAAAA TCATCAGCCT GGATGACTGA
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| Protein sequence | MTCRLLLVDD HSLIRAGVRA LVSDIPGYTV VGEADDGGQL LEQAQQLAPD IILLDISMRS
TSGLDALTLL RASGSTCKVL ILSMHTDPDL IMRALESGAH GYLLKDATAK ELEQALAALR
SGERYLSPAI AHTVINQALM RAQHGKQANI DRHNLTARQL EILRLIVRGK STREIAAGLA
LSIKTVETHR SQIMKRLQIY DVAGLVLFAV REKIISLDD
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