Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2158 |
Symbol | |
ID | 3741310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2431425 |
End bp | 2432057 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637779452 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_385112 |
Protein GI | 78223365 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0301144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA GGATACTTGT AGCCGATGAT CACGCAATCT TCAGGGAAGG GCTCAAGCAG GTTATTGGCA CCACGGTGGA CATGAGCGTT GTCGACGAAG CGGTCGACGG CAAGGAGTTG CTGAACAAGA TACAGGCCAA TGATTACGAC ATGGTGATCC TCGATATCAC CATGCCGGGC AGAAACGGAC TCGATGTCCT GACGGAGATG AAAAGCATCA AACCGAAACT GCCGGTCCTC GTCATGAGCA TGCACCCCGA GGAGCAGTAC GCGCTCCGTG CGTATAAATC GGGGGCAGCG GGCTACCTGA ACAAGGGAAG CGCTTCCAAT GAACTGCTCG ATGCCCTGCA TAAGATTTCC ATGGGGAAAA AATATGTGAG CTCGGCCCTG GCGGAGTCTC TGGTATCCGG TCTCAGTGAT CATAACCAGC AGGATCTCCT CCAGAGTCTC TCCAACAGGG AGTATCAGGT GATGAGCATG ATCGCCTCAG GCAAGACGGT CGGCAAGATC GCCACCGAGC TTTCCCTGAG CGTGAAGACC GTCAGTACCT ACCGGGCCCA CATCCTGCGC AAGCTGAACA TGAAAAACAA CGCGGAACTG ACCCGCTTCG TCATCGAGAA CAAGTTGATC TGA
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Protein sequence | MSTRILVADD HAIFREGLKQ VIGTTVDMSV VDEAVDGKEL LNKIQANDYD MVILDITMPG RNGLDVLTEM KSIKPKLPVL VMSMHPEEQY ALRAYKSGAA GYLNKGSASN ELLDALHKIS MGKKYVSSAL AESLVSGLSD HNQQDLLQSL SNREYQVMSM IASGKTVGKI ATELSLSVKT VSTYRAHILR KLNMKNNAEL TRFVIENKLI
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