| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3375 |
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| Symbol | |
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| ID | 6112327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3718473 |
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| End bp | 3719111 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641623157 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001750228 |
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| Protein GI | 170722540 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTAGGG TCCTAGTGGT CGATGACCAC GATCTGGTGC GAACCGGTAT TACACGCATG
CTGGCCGACA TCGACGGCTT GCAGGTAGTG GGGGAGGCGG ACTCGGGCGA GTCGGCGCTC
AAGCTGGTCC GGGAGCTCAA GCCGGATGTC GTGCTGATGG ACGTCAAGAT GCCTGGCATT
GGTGGCCTTG AGGCTACCCG CAAATTGTTG CGCAGCCACC CTGACACCAA GGTGGTGGCC
GTGACCGTGT GTGAAGAAGA CCCGTTCCCC ACGCGCCTGA TGCAAGCCGG GGCAGCCGGC
TACCTGACCA AAGGCGCGGG GCTGGACGAG ATGGTCCAGG CCATCCGTCT GGCGTTTGCC
GGGCAGCGTT ATATCAGCCC GCAAATTGCC CAGCAACTGG CGCTCAAGTC GTTCCAGCCG
CAAGGTTCGC CGTTCGACGC CCTGTCGGAG CGGGAAATCC AGATCGCCCT TATGATCGTC
GGTTGTCAGA AGGTTCAGCT CATCTCGGAC AAGTTGTGCC TGTCGCCCAA GACCGTCAAT
ACTTACCGGT ATCGGATCTT TGAAAAACTC TCGGTCACCA GCGACGTCGA ACTGACCTTG
CTGGCCGTTC GCCACGGTAT GGTCGACGCA AGCCTCTGA
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| Protein sequence | MIRVLVVDDH DLVRTGITRM LADIDGLQVV GEADSGESAL KLVRELKPDV VLMDVKMPGI
GGLEATRKLL RSHPDTKVVA VTVCEEDPFP TRLMQAGAAG YLTKGAGLDE MVQAIRLAFA
GQRYISPQIA QQLALKSFQP QGSPFDALSE REIQIALMIV GCQKVQLISD KLCLSPKTVN
TYRYRIFEKL SVTSDVELTL LAVRHGMVDA SL
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