Gene Oter_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3372 
Symbol 
ID6207768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4416118 
End bp4416756 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content63% 
IMG OID641693037 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001820249 
Protein GI182415183 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.383896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAA CCGTTCGTTC TGACAAGATC CGGATTCTGC TCGTGGATGA CCACATGGTC 
ATGCGCATGG GGCTCGTGAC GGCCACCAGT GACGAACCGG ACATGGAAGT CGTGGCGGAT
GTGGAGAACG GCGCCGAAGC GATCGAGGCT TACCGGGCGC ACCGGCCGGA CGTCGTCGTG
CTGGATTTGC GGATGCACGG GATGAGTGGC GTGGACGCGA TCCGCGCGCT GCGCAGCGAA
TTTGGCAATG TGCGCGTGCT GGTCTACAGC AACTATGCCG CGGGCGAGGA GGTTTATCAG
GCGCTCAAGG CCGGCGCGTC GGGCTTTGTC GTGAAGGAGA TGGCGCTGGA ACGGTTGCTC
GAGGCGATTC GCAAGGTGCA CGCGGGCGAG CAGTATGTTC CGCCCGAGAT CGCAATGCGC
ATGGGCGAGC GATTGATGGC GCAGCTTTCG CCGCGGGAAC TGGACGTGCT GAAGCTCGTG
GCCAAGGGCC GGAGCAACAA GGAAATCGCC GCCGAGCTCC ACGTGGTGGA GGGCACGGCG
AAGATCCATG TGGCGAACAT CCTGACGAAG CTCGGCGTGT CCGATCGCAC GCAGGCGATC
GTCGTCGCGG TTCGCCGCGG GATCATTCAG ATCGAATAG
 
Protein sequence
MHKTVRSDKI RILLVDDHMV MRMGLVTATS DEPDMEVVAD VENGAEAIEA YRAHRPDVVV 
LDLRMHGMSG VDAIRALRSE FGNVRVLVYS NYAAGEEVYQ ALKAGASGFV VKEMALERLL
EAIRKVHAGE QYVPPEIAMR MGERLMAQLS PRELDVLKLV AKGRSNKEIA AELHVVEGTA
KIHVANILTK LGVSDRTQAI VVAVRRGIIQ IE