| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2449 |
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| Symbol | |
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| ID | 5670845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 2910842 |
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| End bp | 2911477 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641241366 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001506787 |
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| Protein GI | 158314279 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.265588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGTG TTCGCGTCTT CCTGCTGGAC GATCACGAGA TCGTCCGCCG GGGCATCCGG
GAGATGCTGG AGGACTCCGG GGACATCGAG GTCGTCGGCG AGGCGTCGAC CGCGGCGTCT
GCGCTGCGGC GTATCCCGGC CGCCCGTCCG GACGTCGCGG TGCTCGACGC CCGGCTGCCG
GACGGAAGCG GGATCGAGGT GTGCCGGGAG ATCCGCTCGG CGCAGCCCGC CGTCGGCTGT
CTCATCCTGA CCTCCTATGA CGACGACGAC GCGCTCTTCG CCGCGATCAT GGCGGGTGCC
TCGGGGTATC TGCTGAAGCA GATCCGGGGC AACGACCTGG TCGGGGCGAT CCGCACGATC
GCCGCCGGGC GCTCGCTGCT CGACCCCGCC GTCACCCAGA AGGTGCTGGC CCGGCTGCGC
GACGAGCCCG CCGAGGACGA GCAGCTCGCC GCGCTCGGCA GCCGCGAGCG CCAGATCCTC
CGGCTGATCG CCGAGGGCAT GACGAACCGC CAGATCGCGG GCTGCGTCCA CCTGTCGGAG
AAGACGGTGA AGAACTACGT GTCGGCGATC CTCGGCAAGC TCGGCCTGAC CAGCCGCACG
CAGGCCGCCG TGTTCGCGGC CCGGCTCAAG AGCTGA
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| Protein sequence | MTGVRVFLLD DHEIVRRGIR EMLEDSGDIE VVGEASTAAS ALRRIPAARP DVAVLDARLP
DGSGIEVCRE IRSAQPAVGC LILTSYDDDD ALFAAIMAGA SGYLLKQIRG NDLVGAIRTI
AAGRSLLDPA VTQKVLARLR DEPAEDEQLA ALGSRERQIL RLIAEGMTNR QIAGCVHLSE
KTVKNYVSAI LGKLGLTSRT QAAVFAARLK S
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