Gene Ppro_3163 details

Gene Information

• Locus tag: Ppro_3163
• ID: 4573353
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 3472489
• End bp: 3473100
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639757222
• Product: two component LuxR family transcriptional regulator
• Protein accession: YP_902814
• Protein GI: 118581564
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.932633
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGGG TTCTCATCGC CGACGACCAC GTCATGTTCC GCCAGGGACT CATCAACCTG 
CTGACAACCG CTGAAGACAT CCATATCGCC GCCGAATGCG GCGACGGCGC CACGGCCCTG 
GAACTGATCC GCTCCCTGGA ACCGGACATC GCCGTGCTGG ACATCACCAT GCCCAAGCTG 
GACGGCATCT CCATCACCCG CGCCATGGGG AACCTGGGGC TGGCGACGAG GGCGATCATC 
CTGACCATGC ACGATGACCC CCTGATGTAT GGCCGGGCCG TCAGCGCCGG GGCGCACGGC 
TTCATCCTCA AGGACGATGC CTACGAGGAA CTCCTGAGCG CCCTGCGTAC CGTGGCCGCG 
GGAGGAACCG CCATCAGCCG TGCCATACAG CATGCCGCAA TCGAGCCGGA GCCGCCCGTG 
GCGGAGCTGA CGGAACGGGA GAGAGAGATC CTGGGGCTGA TAGCCCACGG CTGCACCAAC 
CGCATGATCG CCCAACATCT GGGCATCAGC ATCAAGACCG TCAACAACCA TCGCACCAAC 
CTGATGGGCA AGCTCAACCT CCACTCCACT GCCGAACTGG TCCGCTACTC CCTCCTGACC 
GGTGGCCTGT AG 

 

Protein sequence

MIRVLIADDH VMFRQGLINL LTTAEDIHIA AECGDGATAL ELIRSLEPDI AVLDITMPKL 
DGISITRAMG NLGLATRAII LTMHDDPLMY GRAVSAGAHG FILKDDAYEE LLSALRTVAA 
GGTAISRAIQ HAAIEPEPPV AELTEREREI LGLIAHGCTN RMIAQHLGIS IKTVNNHRTN 
LMGKLNLHST AELVRYSLLT GGL